RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PDE4CQ08493 712 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 DRAP1Q14919 205 aaPredicted RBP9.66□□□□□ -0.86
SNCA-201ENST00000336904 R3HDM1Q15032 1099 aaKnown RBP9.66□□□□□ -0.86
SNCA-201ENST00000336904 XKR9Q5GH70 373 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 CPNE8Q86YQ8 564 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 TRPM4Q8TD43 1214 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 NACC1Q96RE7 527 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 SELENOOQ9BVL4 669 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 GTPBP4Q9BZE4 634 aaKnown RBP9.66□□□□□ -0.86
SNCA-201ENST00000336904 GBP3Q9H0R5 595 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 DNAJC12Q9UKB3 198 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 MAP2K7O14733 419 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 DHX15O43143 795 aaKnown RBP9.66□□□□□ -0.86
SNCA-201ENST00000336904 GNA14O95837 355 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 BAG6P46379 1132 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 SEMA3FQ13275 785 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 ARHGEF16Q5VV41 709 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 SNRNP48Q6IEG0 339 aaKnown RBP9.66□□□□□ -0.86
SNCA-201ENST00000336904 AADACL2Q6P093 401 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 EEPD1Q7L9B9 569 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 HS2ST1Q7LGA3 356 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 DDX42Q86XP3 938 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNCA-201ENST00000336904 ARHGEF19Q8IW93 802 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 NLGN2Q8NFZ4 835 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 PLEKHO2Q8TD55 490 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 ZNF668Q96K58 619 aaPredicted RBP9.66□□□□□ -0.86
SNCA-201ENST00000336904 NAGPAQ9UK23 515 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 ADAM21Q9UKJ8 722 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 DOCK5Q9H7D0 1870 aa9.66□□□□□ -0.86
SNCA-201ENST00000336904 EMSYQ7Z589 1322 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 ZNF541Q9H0D2 1346 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 DDX3XO00571 662 aaKnown RBP eCLIP9.65□□□□□ -0.86
SNCA-201ENST00000336904 GLI1P08151 1106 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 FAM153BP0C7A2 387 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 YWHABP31946 246 aaKnown RBP9.65□□□□□ -0.86
SNCA-201ENST00000336904 PSMC2P35998 433 aaKnown RBP9.65□□□□□ -0.86
SNCA-201ENST00000336904 FMO5P49326 533 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 PPP3CAQ08209 521 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 ZNF211Q13398 564 aaPredicted RBP9.65□□□□□ -0.86
SNCA-201ENST00000336904 PRPF4BQ13523 1007 aaKnown RBP9.65□□□□□ -0.86
SNCA-201ENST00000336904 PGM5Q15124 567 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 FAM153CQ494X1 144 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 C2CD6Q53TS8 623 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 PHLDB3Q6NSJ2 640 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 CYFIP1Q7L576 1253 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 FRMD5Q7Z6J6 570 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 LNX1Q8TBB1 728 aaPredicted RBP9.65□□□□□ -0.86
SNCA-201ENST00000336904 R3HDMLQ9H3Y0 253 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 TUFT1Q9NNX1 390 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 FAM153AQ9UHL3 310 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 FRMPD4Q14CM0 1322 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 ANKRD65E5RJM6 399 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 CEP104O60308 925 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 RPL13P26373 211 aaKnown RBP9.65□□□□□ -0.86
SNCA-201ENST00000336904 GGCXP38435 758 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 CARSP49589 748 aaKnown RBP9.65□□□□□ -0.86
SNCA-201ENST00000336904 MAP2K1Q02750 393 aaPredicted RBP9.65□□□□□ -0.86
SNCA-201ENST00000336904 GUCY2DQ02846 1103 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 CKAP4Q07065 602 aaKnown RBP9.65□□□□□ -0.86
SNCA-201ENST00000336904 MAPK8IP2Q13387 824 aaPredicted RBP9.65□□□□□ -0.86
SNCA-201ENST00000336904 EPC2Q52LR7 807 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 C8orf74Q6P047 294 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 RNF207Q6ZRF8 634 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 FAM160B2Q86V87 743 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 AGO4Q9HCK5 861 aaKnown RBP9.65□□□□□ -0.86
SNCA-201ENST00000336904 PLCB1Q9NQ66 1216 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 RNF146Q9NTX7 359 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 FAM184BQ9ULE4 1060 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 NFU1Q9UMS0 254 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 FRMD4BQ9Y2L6 1034 aa9.65□□□□□ -0.86
SNCA-201ENST00000336904 SSU72P8A0A1W2PR75 194 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 ANKRD63C9JTQ0 380 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 FOXN3O00409 490 aaPredicted RBP9.64□□□□□ -0.87
SNCA-201ENST00000336904 LCA5LO95447 670 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 RARRES1P49788 294 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 MYL7Q01449 175 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 NAB2Q15742 525 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 CBWD2Q8IUF1 395 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 TSEN2Q8NCE0 465 aaKnown RBP9.64□□□□□ -0.87
SNCA-201ENST00000336904 AGBL3Q8NEM8 1001 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 ARHGEF26Q96DR7 871 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 PI4K2AQ9BTU6 479 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 TRIM31Q9BZY9 425 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 INTS2Q9H0H0 1204 aaKnown RBP9.64□□□□□ -0.87
SNCA-201ENST00000336904 UBE2TQ9NPD8 197 aaPredicted RBP9.64□□□□□ -0.87
SNCA-201ENST00000336904 ANO9A1A5B4 782 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 ITGA4P13612 1032 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 HSD17B4P51659 736 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 MARSP56192 900 aaKnown RBP9.64□□□□□ -0.87
SNCA-201ENST00000336904 SEZ6Q53EL9 994 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 KCTD16Q68DU8 428 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 FOXR1Q6PIV2 292 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 PPP4R3CPQ6ZMV5 832 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 DAAM2Q86T65 1068 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 ZNF526Q8TF50 670 aaPredicted RBP9.64□□□□□ -0.87
SNCA-201ENST00000336904 BSNDQ8WZ55 320 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 BTBD6Q96KE9 485 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 SLC38A10Q9HBR0 1119 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 EPB41L5Q9HCM4 733 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 OLFML3Q9NRN5 406 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms