RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TMOD1P28289 359 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 GALCP54803 685 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 LLGL1Q15334 1064 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 C10orf76Q5T2E6 689 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 THEMIS2Q5TEJ8 643 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 TPCN2Q8NHX9 752 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 DLEC1Q9Y238 1755 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 SPATA31A6Q5VVP1 1343 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 DDX39AO00148 427 aaKnown RBP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 ZBTB39O15060 712 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 RGL2O15211 777 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 TRIM49P0CI25 452 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 TRIM49CP0CI26 452 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 RPA1P27694 616 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 C15orf52Q6ZUT6 534 aaKnown RBP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 SYT2Q8N9I0 419 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 SPDYE1Q8NFV5 336 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 UHMK1Q8TAS1 419 aaKnown RBP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 CCDC114Q96M63 670 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 CCDC113Q9H0I3 377 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 ZCWPW1Q9H0M4 648 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 KCNMB3Q9NPA1 279 aa17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 TYW1Q9NV66 732 aaKnown RBP17.92■□□□□ 0.46
CDC42EP4-201ENST00000335793 GOLGA6L7A0A1B0GV03 622 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 HMGB1P1B2RPK0 211 aaPredicted RBP17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 PDXKO00764 312 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 HOXA7P31268 230 aaPredicted RBP17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 MDH1P40925 334 aaKnown RBP17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 ARHGAP27Q6ZUM4 889 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 CCT8L2Q96SF2 557 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 YIPF3Q9GZM5 350 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 ISCUQ9H1K1 167 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 FRMD4BQ9Y2L6 1034 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 PITPNM2Q9BZ72 1349 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 AHDC1Q5TGY3 1603 aaPredicted RBP17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 EVI5O60447 810 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 CRYMQ14894 314 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 ZYXQ15942 572 aaKnown RBP17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 RUFY4Q6ZNE9 571 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 SYCE1Q8N0S2 351 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 MICAL1Q8TDZ2 1067 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 EIF2AK1Q9BQI3 630 aaKnown RBP17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 EPN3Q9H201 632 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 LRRC4BQ9NT99 713 aa17.91■□□□□ 0.46
CDC42EP4-201ENST00000335793 MEIS2O14770 477 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 EXOC3O60645 756 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 CRKP46108 304 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 SKOR1P84550 965 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 SF3B2Q13435 895 aaKnown RBP17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 CCDC174Q6PII3 467 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 KCNQ5Q9NR82 932 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 DNAJC12Q9UKB3 198 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 LAMB1P07942 1786 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 HDLBPQ00341 1268 aaKnown RBP17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 DRAP1Q14919 205 aaPredicted RBP17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 KDM7AQ6ZMT4 941 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 NLRP14Q86W24 1093 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 FAM178BQ8IXR5 827 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 GJD4Q96KN9 370 aaPredicted RBP17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 TRIM51Q9BSJ1 452 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 CLSTN1O94985 981 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 FERP16591 822 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 TNFRSF8P28908 595 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 PSMC2P35998 433 aaKnown RBP17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 CUL1Q13616 776 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 VPS72Q15906 364 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 TBC1D10BQ4KMP7 808 aaPredicted RBP17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 CPLX4Q7Z7G2 160 aa17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 ZNF473Q8WTR7 871 aaKnown RBP17.9■□□□□ 0.46
CDC42EP4-201ENST00000335793 COL22A1Q8NFW1 1626 aaPredicted RBP17.89■□□□□ 0.46
CDC42EP4-201ENST00000335793 DDTLA6NHG4 134 aaPredicted RBP17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 MSH4O15457 936 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 AP3B2Q13367 1082 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 ZKSCAN8Q15776 578 aaPredicted RBP17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 ZC3H12AQ5D1E8 599 aaKnown RBP17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 ODR4Q5SWX8 454 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 HYIQ5T013 277 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 SEPT12Q8IYM1 358 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 SLC35C1Q96A29 364 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 CHORDC1Q9UHD1 332 aaPredicted RBP17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 AJAP1Q9UKB5 411 aaPredicted RBP17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 ZBTB21Q9ULJ3 1066 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 TRAF3IP3Q9Y228 551 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 IGKV6D-41A0A0C4DH26 115 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 GOLGA6L10A0A0M3HER8 536 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 DDX3XO00571 662 aaKnown RBP eCLIP17.89■□□□□ 0.452e-9■■■■□ 23.1
CDC42EP4-201ENST00000335793 SPATA31C1P0DKV0 1188 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 FLT3P36888 993 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 COG2Q14746 738 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 ABCB5Q2M3G0 1257 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 SH3GL3Q99963 347 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 PLCB1Q9NQ66 1216 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 PI4KBQ9UBF8 816 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 FNTAP49354 379 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 MARSP56192 900 aaKnown RBP17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 PTGISQ16647 500 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 NBPF9Q3BBW0 867 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 CCDC121Q6ZUS5 278 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 SLC35G2Q8TBE7 412 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms