RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SNF8Q96H20 258 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 ANO3Q9BYT9 981 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 ARHGEF3Q9NR81 526 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 POLR1AO95602 1720 aaPredicted RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 TRIM24O15164 1050 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 RGS20O76081 388 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 CYP2C19P33261 490 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 VHLP40337 213 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 DYNLT1P63172 113 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 TRADDQ15628 312 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 SLC39A2Q9NP94 309 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 TUBA8Q9NY65 449 aaPredicted RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 SCN3BQ9NY72 215 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 UHRF1BP1LA0JNW5 1464 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 MYO5CQ9NQX4 1742 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 HNRNPDLO14979 420 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 BIRC5O15392 142 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 MFAP3LO75121 409 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ARIH2O95376 493 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 TBL3Q12788 808 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 DCTN2Q13561 401 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ALCAMQ13740 583 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 FAM47EQ6ZV65 393 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ATP11CQ8NB49 1132 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 LARP4BQ92615 738 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ATAD3AQ9NVI7 634 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 DLGAP2Q9P1A6 1054 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 MYH13Q9UKX3 1938 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 E7EWF7 191 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 FOXO3O43524 673 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 GGPS1O95749 300 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 PSMC2P35998 433 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ZNF658Q5TYW1 1059 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 TTC13Q8NBP0 860 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 P2RX5Q93086 422 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ANKRD36BP1Q96IX9 119 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 OLFM1Q99784 485 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 SLITRK6Q9H5Y7 841 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 NRBP1Q9UHY1 535 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 SMG5Q9UPR3 1016 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 SOX5P35711 763 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 EIF2B2P49770 351 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 TBC1D10BQ4KMP7 808 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 METTL13Q8N6R0 699 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 CCNYQ8ND76 341 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 HINFPQ9BQA5 517 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 FOXP1Q9H334 677 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 TK2O00142 265 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 PPIP5K2O43314 1243 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 KITP10721 976 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 TAB1Q15750 504 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 CCDC80Q76M96 950 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 RSRC2Q7L4I2 434 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ARHGAP22Q7Z5H3 698 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 C3orf20Q8ND61 904 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 PPHLN1Q8NEY8 458 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 CCDC127Q96BQ5 260 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 AP1M1Q9BXS5 423 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 CALN1Q9BXU9 219 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 FAM192AQ9GZU8 254 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 KLHL20Q9Y2M5 609 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 DDX39AO00148 427 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 PLCH2O75038 1416 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 NOS1P29475 1434 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ARMC3Q5W041 872 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ARHGAP17Q68EM7 881 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ARMCX5Q6P1M9 558 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ZNF513Q8N8E2 541 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 FAM133AQ8N9E0 248 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ZCRB1Q8TBF4 217 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 FAF2Q96CS3 445 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 MCRS1Q96EZ8 462 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 IL17RAQ96F46 866 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 GINM1Q9NU53 330 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ARPP21Q9UBL0 812 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 FAM32AQ9Y421 112 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 MAGEA13PA6NCF6 341 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 FGD2Q7Z6J4 655 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 FSD1LQ9BXM9 530 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ADAM30Q9UKF2 790 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 USP15Q9Y4E8 981 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ARHGEF37A1IGU5 675 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 SNTNA6NMZ2 147 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 LONP2Q86WA8 852 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 NDUFAF2Q8N183 169 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ZSCAN10Q96SZ4 725 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 PDZK1P1A8MUH7 402 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 MAP3K13O43283 966 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 TRIP13Q15645 432 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 USH1GQ495M9 461 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 RCSD1Q6JBY9 416 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 SPATA21Q7Z572 469 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 PASD1Q8IV76 773 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 EXT2Q93063 718 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 ZBTB10Q96DT7 871 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 PAPOLBQ9NRJ5 636 aaKnown RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 PCDHA12Q9UN75 941 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 DNALI1O14645 258 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-201ENST00000335551 FTCDO95954 541 aa6.56□□□□□ -1.36
CSMD1-201ENST00000335551 CHRNA3P32297 505 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms