RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 NUDT12Q9BQG2 462 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 TMEM106CQ9BVX2 250 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 PLCB1Q9NQ66 1216 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 PFDN4Q9NQP4 134 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 ADAM22Q9P0K1 906 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 SUCLA2Q9P2R7 463 aaPredicted RBP16.17■□□□□ 0.18
C9orf47-201ENST00000334490 VEGFAP15692 232 aaPredicted RBP16.17■□□□□ 0.18
C9orf47-201ENST00000334490 SMARCA1P28370 1054 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 INPP5BP32019 993 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 GUCY2DQ02846 1103 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 PRPSAP1Q14558 356 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 CDO1Q16878 200 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 SGO2Q562F6 1265 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 KCTD6Q8NC69 237 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 TMEM143Q96AN5 459 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 RBAKQ9NYW8 714 aaPredicted RBP16.17■□□□□ 0.18
C9orf47-201ENST00000334490 MOCS3O95396 460 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 IL1R1P14778 569 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 SREBF2Q12772 1141 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 ZMYND12Q9H0C1 365 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 PRDM5Q9NQX1 630 aaPredicted RBP16.17■□□□□ 0.18
C9orf47-201ENST00000334490 PCDHA13Q9Y5I0 950 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 DDTLA6NHG4 134 aaPredicted RBP16.17■□□□□ 0.18
C9orf47-201ENST00000334490 TSPY1Q01534 308 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 SNX1Q13596 522 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 VPS52Q8N1B4 723 aa16.17■□□□□ 0.18
C9orf47-201ENST00000334490 PANX2Q96RD6 677 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 TRIM9Q9C026 710 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 MCF2LO15068 1137 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 CXCR5P32302 372 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 GTF2A2P52657 109 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 KRT39Q6A163 491 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 NDUFAB1O14561 156 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 MFAP3LO75121 409 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 CTSHP09668 335 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 TRIM49P0CI25 452 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 TRIM49CP0CI26 452 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 YWHAGP61981 247 aaKnown RBP eCLIP16.16■□□□□ 0.18
C9orf47-201ENST00000334490 SLC4A9Q96Q91 983 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 MXRA8Q9BRK3 442 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 KIF9Q9HAQ2 790 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.16■□□□□ 0.18
C9orf47-201ENST00000334490 OGFRQ9NZT2 677 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 PIN4Q9Y237 131 aaKnown RBP16.16■□□□□ 0.18
C9orf47-201ENST00000334490 EFCAB8A8MWE9 144 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 I3L4J1 428 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 HGSO14964 777 aaPredicted RBP16.16■□□□□ 0.18
C9orf47-201ENST00000334490 PFDN6O15212 129 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 PRKCBP05771 671 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 CASP7P55210 303 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 CEP85LQ5SZL2 805 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 ANKRD42Q8N9B4 389 aa16.16■□□□□ 0.18
C9orf47-201ENST00000334490 PGRMC1O00264 195 aaKnown RBP16.15■□□□□ 0.18
C9orf47-201ENST00000334490 RGL2O15211 777 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 BRD3Q15059 726 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 GPD1LQ8N335 351 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 GBA2Q9HCG7 927 aaPredicted RBP16.15■□□□□ 0.18
C9orf47-201ENST00000334490 CEP72Q9P209 647 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.15■□□□□ 0.18
C9orf47-201ENST00000334490 KBTBD13C9JR72 458 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 ACTN1P12814 892 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 SAT1P21673 171 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 BACE1P56817 501 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 PASD1Q8IV76 773 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 SCINQ9Y6U3 715 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 NEURL4Q96JN8 1562 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 NPHP3-ACAD11A0A0J9YXS1 232 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 ARL13BQ3SXY8 428 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 KIF12Q96FN5 646 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 TAAR1Q96RJ0 339 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 FAM217BQ9NTX9 383 aaPredicted RBP16.15■□□□□ 0.18
C9orf47-201ENST00000334490 MAFGO15525 162 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 DUOXA2Q1HG44 320 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 DAAM1Q9Y4D1 1078 aa16.15■□□□□ 0.18
C9orf47-201ENST00000334490 GMNNO75496 209 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 FDPSP14324 419 aaKnown RBP16.14■□□□□ 0.17
C9orf47-201ENST00000334490 CIITAP33076 1130 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 MMP14P50281 582 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 GNASQ5JWF2 1037 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 MGARPQ8TDB4 240 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 HPS3Q969F9 1004 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 KATNAL1Q9BW62 490 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 MAD2L2Q9UI95 211 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 EIF3CLB5ME19 914 aaKnown RBP16.14■□□□□ 0.17
C9orf47-201ENST00000334490 PSMA2P25787 234 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 EIF3CQ99613 913 aaKnown RBP16.14■□□□□ 0.17
C9orf47-201ENST00000334490 MAP1SQ66K74 1059 aaPredicted RBP16.14■□□□□ 0.17
C9orf47-201ENST00000334490 RHOT2Q8IXI1 618 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 DNAAF3Q8N9W5 541 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 FBXO41Q8TF61 875 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 RUNDC3BQ96NL0 473 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 RIT2Q99578 217 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 RABEP2Q9H5N1 569 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 KCNH7Q9NS40 1196 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 MXD4Q14582 209 aaPredicted RBP16.14■□□□□ 0.17
C9orf47-201ENST00000334490 DARS2Q6PI48 645 aaKnown RBP16.14■□□□□ 0.17
C9orf47-201ENST00000334490 ADGRA1Q86SQ6 560 aa16.14■□□□□ 0.17
C9orf47-201ENST00000334490 CNOT8Q9UFF9 292 aaKnown RBP16.14■□□□□ 0.17
C9orf47-201ENST00000334490 ZNF500O60304 480 aaPredicted RBP16.13■□□□□ 0.17
C9orf47-201ENST00000334490 ICAM1P05362 532 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms