RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 IRS4O14654 1257 aaPredicted RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 PRDM1O75626 825 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 MOCS3O95396 460 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 HOXB6P17509 224 aaKnown RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 SERPINB9P50453 376 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ASPRV1Q53RT3 343 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 CENPPQ6IPU0 288 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 TRPM8Q7Z2W7 1104 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 RTL3Q8N8U3 475 aaKnown RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 PRPF18Q99633 342 aaKnown RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 TINF2Q9BSI4 451 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 PSTPIP2Q9H939 334 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ZNF556Q9HAH1 456 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 HPCAL4Q9UM19 191 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 PZPP20742 1482 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 CDH16O75309 829 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 RASGRF1Q13972 1273 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 DPCR1Q3MIW9 517 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 BSPRYQ5W0U4 402 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 C11orf57Q6ZUT1 292 aaPredicted RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ELOA2Q8IYF1 753 aaPredicted RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 SSH3Q8TE77 659 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TRPC4APQ8TEL6 797 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 USP28Q96RU2 1077 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 STOML2Q9UJZ1 356 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 MRPL11Q9Y3B7 192 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TBXAS1P24557 533 aaPredicted RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 NUP62P37198 522 aaPredicted RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 GPATCH4Q5T3I0 446 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 DEPDC1Q5TB30 811 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ZNF473Q8WTR7 871 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TTC17Q96AE7 1141 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 EME1Q96AY2 570 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 PHF21AQ96BD5 680 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 LRRC39Q96DD0 335 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 NCOA5Q9HCD5 579 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 RCOR1Q9UKL0 485 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 INTUQ9ULD6 942 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ZBTB21Q9ULJ3 1066 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ARIH1Q9Y4X5 557 aaPredicted RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 DNAJC6O75061 913 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 SRP72O76094 671 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 EIF4A3P38919 411 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 CYP2J2P51589 502 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 COPS6Q7L5N1 327 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 DYMQ7RTS9 669 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 KRT27Q7Z3Y8 459 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 FAM9CQ8IZT9 166 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 PXDNLA1KZ92 1463 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ZBED1O96006 694 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 KRT19P08727 400 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 CC2D2BQ6DHV5 1058 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TMEM245Q9H330 911 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ZFATQ9P243 1243 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 RSL24D1Q9UHA3 163 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 CDC42BPAQ5VT25 1732 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ZBED4O75132 1171 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 KCNQ4P56696 695 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 KRT72Q14CN4 511 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 KLHL12Q53G59 568 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 SLFN12LQ6IEE8 588 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TOGARAM2Q6ZUX3 1019 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ENOSF1Q7L5Y1 443 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 CDKL3Q8IVW4 592 aaPredicted RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 CCDC103Q8IW40 242 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 PLIN2Q99541 437 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 AS3MTQ9HBK9 375 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 PCDHA12Q9UN75 941 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 A8MXQ7 604 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 MYO1DO94832 1006 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 OSBPL8Q9BZF1 889 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 SCN3BQ9NY72 215 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TUBGCP4Q9UGJ1 667 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 FRMPD1Q5SYB0 1578 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ZBTB24O43167 697 aaPredicted RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ASNA1O43681 348 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 SNX2O60749 519 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 HDDC2Q7Z4H3 204 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ARHGAP22Q7Z5H3 698 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 C16orf71Q8IYS4 520 aaPredicted RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 CCDC28BQ9BUN5 200 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 BSDC1Q9NW68 430 aaPredicted RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 MAN1B1Q9UKM7 699 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 FAM47DPA6NHR8 397 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 AP3M2P53677 418 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 CHST3Q7LGC8 479 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 MB21D1Q8N884 522 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ZCRB1Q8TBF4 217 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 PNMA8CA0A1B0GUJ8 204 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TK2O00142 265 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 SLC16A3O15427 465 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 AHCYL1O43865 530 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 HMOX2P30519 316 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 CTCFP49711 727 aaPredicted RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 EIF4A2Q14240 407 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 FAM47CQ5HY64 1035 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 SPDYCQ5MJ68 293 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TMEM154Q6P9G4 183 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TSSK1BQ9BXA7 367 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ADNPQ9H2P0 1102 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms