RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 TMEM154Q6P9G4 183 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 RFX8Q6ZV50 586 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 FAM114A1Q8IWE2 563 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 TGFBRAP1Q8WUH2 860 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 CELF1Q92879 486 aaKnown RBP12.03□□□□□ -0.48
CCDC87-201ENST00000333861 NUCKS1Q9H1E3 243 aaKnown RBP12.03□□□□□ -0.48
CCDC87-201ENST00000333861 ATP6V0A2Q9Y487 856 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 A0A1W2PQJ5 194 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 LCA5LO95447 670 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 TSPY3P0CV98 308 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 TSPY8P0CW00 308 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 GNAT2P19087 354 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 TRAF1Q13077 416 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 TRIM28Q13263 835 aaKnown RBP12.03□□□□□ -0.48
CCDC87-201ENST00000333861 HERC4Q5GLZ8 1057 aaPredicted RBP12.03□□□□□ -0.48
CCDC87-201ENST00000333861 CNNM4Q6P4Q7 775 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 LARP4BQ92615 738 aaKnown RBP12.03□□□□□ -0.48
CCDC87-201ENST00000333861 EZH1Q92800 747 aaPredicted RBP12.03□□□□□ -0.48
CCDC87-201ENST00000333861 CALML4Q96GE6 196 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 CRAMP1Q96RY5 1269 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 FMO2Q99518 471 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 ETNK1Q9HBU6 452 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 LMCD1Q9NZU5 365 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 RTN3O95197 1032 aaPredicted RBP12.02□□□□□ -0.48
CCDC87-201ENST00000333861 HNRNPH3P31942 346 aaKnown RBP12.02□□□□□ -0.48
CCDC87-201ENST00000333861 CUL1Q13616 776 aa12.02□□□□□ -0.48
CCDC87-201ENST00000333861 GLYCTKQ8IVS8 523 aa12.02□□□□□ -0.48
CCDC87-201ENST00000333861 LRRC47Q8N1G4 583 aaKnown RBP12.02□□□□□ -0.48
CCDC87-201ENST00000333861 SUPT20HQ8NEM7 779 aa12.02□□□□□ -0.48
CCDC87-201ENST00000333861 ARHGEF1Q92888 912 aaKnown RBP12.02□□□□□ -0.48
CCDC87-201ENST00000333861 PCDHB13Q9Y5F0 798 aa12.02□□□□□ -0.48
CCDC87-201ENST00000333861 SNX3O60493 162 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 SERPING1P05155 500 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 KRT18P05783 430 aaKnown RBP12.02□□□□□ -0.49
CCDC87-201ENST00000333861 COPS2P61201 443 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 ATP11AP98196 1134 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 KCNH2Q12809 1159 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 ADAM9Q13443 819 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 RIPK1Q13546 671 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 SLC18A3Q16572 532 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 ARHGAP44Q17R89 818 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 DAB2IPQ5VWQ8 1189 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 ALKBH5Q6P6C2 394 aaKnown RBP12.02□□□□□ -0.49
CCDC87-201ENST00000333861 RPUSD2Q8IZ73 545 aaKnown RBP12.02□□□□□ -0.49
CCDC87-201ENST00000333861 TTC8Q8TAM2 541 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 SCFD2Q8WU76 684 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 EPB41L4BQ9H329 900 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 METTL5Q9NRN9 209 aaKnown RBP12.02□□□□□ -0.49
CCDC87-201ENST00000333861 TMEM59LQ9UK28 342 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 PNPLA7Q6ZV29 1317 aa12.02□□□□□ -0.49
CCDC87-201ENST00000333861 POTEB3A0JP26 581 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 LRRD1A4D1F6 860 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 POTECB2RU33 542 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 SMAPO00193 183 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 RPS6KA4O75676 772 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 FESP07332 822 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 PYGBP11216 843 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 GM2AP17900 193 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 RFC4P35249 363 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 COASYQ13057 564 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 CALCRLQ16602 461 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 POTEBQ6S5H4 581 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 ARMC9Q7Z3E5 817 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 ZNF34Q8IZ26 560 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 RNF10Q8N5U6 811 aaKnown RBP12.01□□□□□ -0.49
CCDC87-201ENST00000333861 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 CNKSR1Q969H4 720 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 TLCD1Q96CP7 247 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 HOMER3Q9NSC5 361 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 COL4A3BPQ9Y5P4 624 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 MROH5Q6ZUA9 1318 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 BRWD3Q6RI45 1802 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 PGRMC1O00264 195 aaKnown RBP12.01□□□□□ -0.49
CCDC87-201ENST00000333861 LACTBP83111 547 aaPredicted RBP12.01□□□□□ -0.49
CCDC87-201ENST00000333861 DCAF12L1Q5VU92 463 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 TBC1D9BQ66K14 1250 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 ARL6IP4Q66PJ3 421 aaKnown RBP12.01□□□□□ -0.49
CCDC87-201ENST00000333861 ZNF449Q6P9G9 518 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 UTP4Q969X6 686 aaKnown RBP12.01□□□□□ -0.49
CCDC87-201ENST00000333861 ARHGEF26Q96DR7 871 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 FAM84AQ96KN4 292 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 PLA2G12BQ9BX93 195 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 ZMYND12Q9H0C1 365 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 TSKSQ9UJT2 592 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 KIAA1024Q9UPX6 916 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 ZNF652Q9Y2D9 606 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 UTP11Q9Y3A2 253 aaKnown RBP12.01□□□□□ -0.49
CCDC87-201ENST00000333861 NUP188Q5SRE5 1749 aa12.01□□□□□ -0.49
CCDC87-201ENST00000333861 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12□□□□□ -0.49
CCDC87-201ENST00000333861 CFAP73A6NFT4 308 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 SRRM3A6NNA2 597 aaPredicted RBP12□□□□□ -0.49
CCDC87-201ENST00000333861 USP17L5A8MUK1 530 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 RSPH10B2B2RC85 870 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 ENTPD5O75356 428 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 RSPH10BP0C881 870 aa12□□□□□ -0.49
CCDC87-201ENST00000333861 TARSP26639 723 aaKnown RBP12□□□□□ -0.49
CCDC87-201ENST00000333861 POLD1P28340 1107 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms