RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 A0A087X0T9 212 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 FAM228BP0C875 321 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 GRB10Q13322 594 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 DYNC1I2Q13409 638 aaKnown RBP12.81□□□□□ -0.36
LIMK2-202ENST00000333611 RPS6KA1Q15418 735 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 C12orf60Q5U649 245 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 APBB1IPQ7Z5R6 666 aaPredicted RBP12.81□□□□□ -0.36
LIMK2-202ENST00000333611 DGKHQ86XP1 1220 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 CEP70Q8NHQ1 597 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 NKX1-2Q9UD57 310 aaPredicted RBP12.81□□□□□ -0.36
LIMK2-202ENST00000333611 SUGT1Q9Y2Z0 365 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 ZNF804BA4D1E1 1349 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 TCP11X1B4DZS4 312 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 E9PMD0 336 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 FLOT1O75955 427 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 BAG3O95817 575 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 GSTT1P30711 240 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 USP46P62068 366 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 ASIC2Q16515 512 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 KIFAP3Q92845 792 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 L3MBTL3Q96JM7 780 aaPredicted RBP12.8□□□□□ -0.36
LIMK2-202ENST00000333611 MMTAG2Q9BU76 263 aaKnown RBP12.8□□□□□ -0.36
LIMK2-202ENST00000333611 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.8□□□□□ -0.364e-6■■■■■ 105.2
LIMK2-202ENST00000333611 ADAM22Q9P0K1 906 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 SIK3Q9Y2K2 1263 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 FLT1P17948 1338 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 ZSCAN9O15535 394 aaPredicted RBP12.8□□□□□ -0.36
LIMK2-202ENST00000333611 PCP11498 1178 aaKnown RBP12.8□□□□□ -0.36
LIMK2-202ENST00000333611 FLT3P36888 993 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 MTA1Q13330 715 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 FAM26FQ5R3K3 315 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 TRMT1LQ7Z2T5 733 aaKnown RBP12.8□□□□□ -0.36
LIMK2-202ENST00000333611 MRRFQ96E11 262 aaKnown RBP12.8□□□□□ -0.36
LIMK2-202ENST00000333611 C7orf25Q9BPX7 421 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 FGFBP2Q9BYJ0 223 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 CELF4Q9BZC1 486 aaKnown RBP12.8□□□□□ -0.36
LIMK2-202ENST00000333611 RAB34Q9BZG1 259 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 AMACRQ9UHK6 382 aa12.8□□□□□ -0.36
LIMK2-202ENST00000333611 MEIS1O00470 390 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 SUN1O94901 812 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 PDE1CQ14123 709 aaPredicted RBP12.79□□□□□ -0.36
LIMK2-202ENST00000333611 TBC1D9BQ66K14 1250 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 DNAJC14Q6Y2X3 702 aaPredicted RBP12.79□□□□□ -0.36
LIMK2-202ENST00000333611 CAVIN3Q969G5 261 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 VCX3BQ9H321 246 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 VCX3AQ9NNX9 186 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 KIAA1024Q9UPX6 916 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 KRT13P13646 458 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 ABCB4P21439 1286 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 SP100P23497 879 aaPredicted RBP12.79□□□□□ -0.36
LIMK2-202ENST00000333611 NCALDP61601 193 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 CRELD2Q6UXH1 353 aaPredicted RBP12.79□□□□□ -0.36
LIMK2-202ENST00000333611 UNC13DQ70J99 1090 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 CEP95Q96GE4 821 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 AK8Q96MA6 479 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 MTFR1LQ9H019 292 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 COL4A3BPQ9Y5P4 624 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 LRP6O75581 1613 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 HIC2Q96JB3 615 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 SETDB2Q96T68 719 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 CYTH2Q99418 400 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 BLOC1S4Q9NUP1 217 aa12.79□□□□□ -0.36
LIMK2-202ENST00000333611 KRIT1O00522 736 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 TXNDC9O14530 226 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 TARSP26639 723 aaKnown RBP12.78□□□□□ -0.36
LIMK2-202ENST00000333611 COPB2P35606 906 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 CACNA2D1P54289 1103 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 PLTPP55058 493 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 BYSLQ13895 437 aaKnown RBP12.78□□□□□ -0.36
LIMK2-202ENST00000333611 CENPPQ6IPU0 288 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 LCA5Q86VQ0 697 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 NMD3Q96D46 503 aaKnown RBP12.78□□□□□ -0.36
LIMK2-202ENST00000333611 CARD9Q9H257 536 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 WDR35Q9P2L0 1181 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 DBR1Q9UK59 544 aaKnown RBP12.78□□□□□ -0.36
LIMK2-202ENST00000333611 BCS1LQ9Y276 419 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 BAG2O95816 211 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 ADCY7P51828 1080 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 IKQ13123 557 aaPredicted RBP12.78□□□□□ -0.36
LIMK2-202ENST00000333611 MAP7D1Q3KQU3 841 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 GPBP1Q86WP2 473 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 PNMA5Q96PV4 448 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 PURBQ96QR8 312 aaKnown RBP12.78□□□□□ -0.36
LIMK2-202ENST00000333611 MAF1Q9H063 256 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 CUEDC2Q9H467 287 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 SH3GLB2Q9NR46 395 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 GOLGB1Q14789 3259 aaKnown RBP12.78□□□□□ -0.36
LIMK2-202ENST00000333611 BCL9O00512 1426 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 ENTPD5O75356 428 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 SLURP2P0DP57 97 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 STAT3P40763 770 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 BTDP43251 543 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 COPS2P61201 443 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 COG7P83436 770 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 FKBP3Q00688 224 aaKnown RBP12.78□□□□□ -0.36
LIMK2-202ENST00000333611 KCNMA1Q12791 1236 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 COASYQ13057 564 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 FAM182BQ5T319 152 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 ARHGAP18Q8N392 663 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 PPFIBP2Q8ND30 876 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms