RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FAM186BQ8IYM0 893 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 SCFD2Q8WU76 684 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 FAM213AQ9BRX8 229 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 GUCA1BQ9UMX6 200 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 KIF2AO00139 706 aaPredicted RBP17.36■□□□□ 0.37
PDGFB-201ENST00000331163 VTNP04004 478 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 DNM2P50570 870 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 MTF1Q14872 753 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 SAPCD2Q86UD0 394 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 DHTKD1Q96HY7 919 aaPredicted RBP17.36■□□□□ 0.37
PDGFB-201ENST00000331163 RSPH14Q9UHP6 348 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 UBIAD1Q9Y5Z9 338 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.35■□□□□ 0.37
PDGFB-201ENST00000331163 NKRFO15226 690 aaKnown RBP eCLIP17.35■□□□□ 0.373e-6■■■□□ 15.7
PDGFB-201ENST00000331163 CDC25BP30305 580 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 CIITAP33076 1130 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 TFR2Q9UP52 801 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 NR3C1P04150 777 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 ACTN1P12814 892 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 CYP27A1Q02318 531 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
PDGFB-201ENST00000331163 KNOP1Q1ED39 458 aaKnown RBP17.35■□□□□ 0.37
PDGFB-201ENST00000331163 NOL9Q5SY16 702 aaKnown RBP17.35■□□□□ 0.37
PDGFB-201ENST00000331163 MROH8Q9H579 483 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 MACROD2A1Z1Q3 448 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 SOWAHDA6NJG2 315 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 ASB14A6NK59 587 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 KLRC4O43908 158 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 BRDTQ58F21 947 aaPredicted RBP17.35■□□□□ 0.37
PDGFB-201ENST00000331163 DNAAF5Q86Y56 855 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 SCFD1Q8WVM8 642 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 HSD17B14Q9BPX1 270 aa17.35■□□□□ 0.37
PDGFB-201ENST00000331163 TRIM6Q9C030 488 aaPredicted RBP17.35■□□□□ 0.37
PDGFB-201ENST00000331163 ZNF862O60290 1169 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 SARSP49591 514 aaKnown RBP17.34■□□□□ 0.37
PDGFB-201ENST00000331163 PHLDB2Q86SQ0 1253 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 PPM1KQ8N3J5 372 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 RAET1EQ8TD07 263 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 IPO4Q8TEX9 1081 aaKnown RBP17.34■□□□□ 0.37
PDGFB-201ENST00000331163 POP1Q99575 1024 aaKnown RBP17.34■□□□□ 0.37
PDGFB-201ENST00000331163 TUFT1Q9NNX1 390 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 SFNP31947 248 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 TNFAIP2Q03169 654 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 GPRASP2Q96D09 838 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 CBWD1Q9BRT8 395 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 NDST4Q9H3R1 872 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 ATP6V0A4Q9HBG4 840 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 SETD4Q9NVD3 440 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 PVALEFA0A1B0GWK0 134 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 TMEM88BA6NKF7 163 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 DKC1O60832 514 aaKnown RBP eCLIP17.34■□□□□ 0.37
PDGFB-201ENST00000331163 CYP3A4P08684 503 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 KRT5P13647 590 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 SLC12A3P55017 1021 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 ETF1P62495 437 aaKnown RBP17.34■□□□□ 0.37
PDGFB-201ENST00000331163 MAP2K1Q02750 393 aaPredicted RBP17.34■□□□□ 0.37
PDGFB-201ENST00000331163 SARM1Q6SZW1 724 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 ANO5Q75V66 913 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 CAPNS2Q96L46 248 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 MED15Q96RN5 788 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 TARS2Q9BW92 718 aaKnown RBP17.34■□□□□ 0.37
PDGFB-201ENST00000331163 PCDH10Q9P2E7 1040 aa17.34■□□□□ 0.37
PDGFB-201ENST00000331163 LDLRAD1Q5T700 205 aa17.33■□□□□ 0.37
PDGFB-201ENST00000331163 SH3RF1Q7Z6J0 888 aa17.33■□□□□ 0.37
PDGFB-201ENST00000331163 SMC1BQ8NDV3 1235 aa17.33■□□□□ 0.37
PDGFB-201ENST00000331163 C12orf42Q96LP6 360 aa17.33■□□□□ 0.37
PDGFB-201ENST00000331163 MAGEF1Q9HAY2 307 aa17.33■□□□□ 0.37
PDGFB-201ENST00000331163 TIAM2Q8IVF5 1701 aa17.33■□□□□ 0.37
PDGFB-201ENST00000331163 LRRC37AA6NMS7 1700 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 RGS20O76081 388 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 DRP2Q13474 957 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 SMC1AQ14683 1233 aaKnown RBP17.33■□□□□ 0.36
PDGFB-201ENST00000331163 EMC2Q15006 297 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 DNAJC19Q96DA6 116 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 CCDC42Q96M95 316 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 CYP26B1Q9NR63 512 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 AGPAT5Q9NUQ2 364 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.33■□□□□ 0.36
PDGFB-201ENST00000331163 KIAA1551Q9HCM1 1747 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 BRCA2P51587 3418 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 CYP3A7-CYP3A51PA0A087WV96 503 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 CYP3A7P24462 503 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 NOP2P46087 812 aaKnown RBP17.33■□□□□ 0.36
PDGFB-201ENST00000331163 GCLCP48506 637 aaPredicted RBP17.33■□□□□ 0.36
PDGFB-201ENST00000331163 ZSCAN26Q16670 478 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 KIZQ2M2Z5 673 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 CT47A1Q5JQC4 288 aaPredicted RBP17.33■□□□□ 0.36
PDGFB-201ENST00000331163 GPAT2Q6NUI2 795 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 CCDC150Q8NCX0 1101 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 SYNPO2Q9UMS6 1093 aa17.33■□□□□ 0.36
PDGFB-201ENST00000331163 SUPT20HL2P0C7V6 817 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 LLGL1Q15334 1064 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 SPA17Q15506 151 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 TMEM119Q4V9L6 283 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 ZNF394Q53GI3 561 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 PLA2G6O60733 806 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 SSR1P43307 286 aaKnown RBP17.32■□□□□ 0.36
PDGFB-201ENST00000331163 FLT3LGP49771 235 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 OAZ1P54368 228 aa17.32■□□□□ 0.36
PDGFB-201ENST00000331163 TFAMQ00059 246 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms