RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 FAM83BQ5T0W9 1011 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 PPP1R21Q6ZMI0 780 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 INTS8Q75QN2 995 aaKnown RBP9.06□□□□□ -0.96
SKA2-201ENST00000330137 CATIPQ7Z7H3 387 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 PPFIBP2Q8ND30 876 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 FAM13CQ8NE31 585 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 ESR2Q92731 530 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 CEP63Q96MT8 703 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 TSG101Q99816 390 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 UBE2OQ9C0C9 1292 aaKnown RBP9.06□□□□□ -0.96
SKA2-201ENST00000330137 DDX47Q9H0S4 455 aaKnown RBP9.06□□□□□ -0.96
SKA2-201ENST00000330137 CARD9Q9H257 536 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 EPB41L1Q9H4G0 881 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 AZI2Q9H6S1 392 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 CCDC87Q9NVE4 849 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 WDR37Q9Y2I8 494 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 USH1CQ9Y6N9 552 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 PLCH1Q4KWH8 1693 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 ZNF532Q9HCE3 1301 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 ARAP2Q8WZ64 1704 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 TCP11X1B4DZS4 312 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 TTI1O43156 1089 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 GGPS1O95749 300 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 PCCAP05165 728 aaPredicted RBP9.05□□□□□ -0.96
SKA2-201ENST00000330137 CACNA2D1P54289 1103 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 AUHQ13825 339 aaKnown RBP9.05□□□□□ -0.96
SKA2-201ENST00000330137 KIAA1755Q5JYT7 1200 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 RNF220Q5VTB9 566 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 KIF2BQ8N4N8 673 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 TPCN2Q8NHX9 752 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 ZNF398Q8TD17 642 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 LRRC8CQ8TDW0 803 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 GFM2Q969S9 779 aaKnown RBP9.05□□□□□ -0.96
SKA2-201ENST00000330137 RNF25Q96BH1 459 aaPredicted RBP9.05□□□□□ -0.96
SKA2-201ENST00000330137 SMC6Q96SB8 1091 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 SPATA16Q9BXB7 569 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 ZNF212Q9UDV6 495 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 DNAJB4Q9UDY4 337 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 C10orf71Q711Q0 1435 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 TLR2O60603 784 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 PDHA1P08559 390 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 PIM1P11309 404 aaPredicted RBP9.05□□□□□ -0.96
SKA2-201ENST00000330137 PRKCIP41743 596 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 MCAMP43121 646 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 DR1Q01658 176 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 STRN3Q13033 797 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 SCARF1Q14162 830 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 MAP7Q14244 749 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 TMTC3Q6ZXV5 915 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 CYFIP1Q7L576 1253 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 DAGLBQ8NCG7 672 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 SEMA6BQ9H3T3 888 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 FGFR1OP2Q9NVK5 253 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 NENFQ9UMX5 172 aa9.05□□□□□ -0.96
SKA2-201ENST00000330137 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.05□□□□□ -0.96
SKA2-201ENST00000330137 SHBGP04278 402 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 CPA3P15088 417 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 MARK3P27448 753 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 PTPN4P29074 926 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 RPL26P61254 145 aaKnown RBP9.04□□□□□ -0.96
SKA2-201ENST00000330137 SULT2A1Q06520 285 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 KLHL30Q0D2K2 578 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 AP1B1Q10567 949 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 KCNMA1Q12791 1236 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 ITGA9Q13797 1035 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 ENOX2Q16206 610 aaKnown RBP9.04□□□□□ -0.96
SKA2-201ENST00000330137 ASIC2Q16515 512 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 ZNF568Q3ZCX4 644 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 DAB2IPQ5VWQ8 1189 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 PEX26Q7Z412 305 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 EXOC3L1Q86VI1 746 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 TRIM42Q8IWZ5 723 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 EPB41L4AQ9HCS5 686 aaPredicted RBP9.04□□□□□ -0.96
SKA2-201ENST00000330137 TCP11L1Q9NUJ3 509 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 NMRK1Q9NWW6 199 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 GALNT8Q9NY28 637 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 STK17AQ9UEE5 414 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 PCYOX1Q9UHG3 505 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 SSX2IPQ9Y2D8 614 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 PALM3A6NDB9 673 aaPredicted RBP9.04□□□□□ -0.96
SKA2-201ENST00000330137 SOCS7O14512 581 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 RIPK2O43353 540 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 STRNO43815 780 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 NOL4O94818 638 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 KCNA3P22001 575 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 ADORA1P30542 326 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 CHRNA3P32297 505 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 MCM7P33993 719 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 IFI35P80217 286 aaPredicted RBP9.04□□□□□ -0.96
SKA2-201ENST00000330137 STK4Q13043 487 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 SLC29A2Q14542 456 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 PFKFB3Q16875 520 aaPredicted RBP9.04□□□□□ -0.96
SKA2-201ENST00000330137 BICDL1Q6ZP65 573 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 LRRC55Q6ZSA7 311 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 KCNV2Q8TDN2 545 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 PPP2R3CQ969Q6 453 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 GJD4Q96KN9 370 aaPredicted RBP9.04□□□□□ -0.96
SKA2-201ENST00000330137 ZMYND8Q9ULU4 1186 aaPredicted RBP9.04□□□□□ -0.96
SKA2-201ENST00000330137 CD2APQ9Y5K6 639 aa9.04□□□□□ -0.96
SKA2-201ENST00000330137 MYH4Q9Y623 1939 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms