RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 MTFR1LQ9H019 292 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 KANSL2Q9H9L4 492 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 METTL14Q9HCE5 456 aaKnown RBP12.2□□□□□ -0.46
GINS3-202ENST00000328514 TMEM260Q9NX78 707 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 STX8Q9UNK0 236 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 PCDHA3Q9Y5H8 950 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 A6NHS1 94 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 SLC16A3O15427 465 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 VIMP08670 466 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 RARGP13631 454 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 CCNB1P14635 433 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 LMNB1P20700 586 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 NR2F2P24468 414 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 HIBADHP31937 336 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 CHRNA3P32297 505 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 ADCY7P51828 1080 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 GALCP54803 685 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 PPP4CP60510 307 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 PPARDQ03181 441 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 AUHQ13825 339 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 R3HDM1Q15032 1099 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 TCEAL1Q15170 157 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 FAM133BQ5BKY9 247 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 CMPK2Q5EBM0 449 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 CAPRIN2Q6IMN6 1127 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 KIRREL3Q8IZU9 778 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 NEDD1Q8NHV4 660 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 FBXO25Q8TCJ0 367 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 HAS1Q92839 578 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 RUNDC3BQ96NL0 473 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 PIGSQ96S52 555 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 ECT2Q9H8V3 914 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 SLC24A3Q9HC58 644 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 SPATS2LQ9NUQ6 558 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 CCDC87Q9NVE4 849 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 PRKAG3Q9UGI9 489 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 PPP1R9AQ9ULJ8 1098 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.46
GINS3-202ENST00000328514 SNED1Q8TER0 1413 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 ANKRD33BA6NCL7 494 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 IGF2BP3O00425 579 aaKnown RBP eCLIP12.19□□□□□ -0.46
GINS3-202ENST00000328514 PDXKO00764 312 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 PLA2G4BP0C869 781 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 XRCC5P13010 732 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 ALAS1P13196 640 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 CYP11B2P19099 503 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 VCAM1P19320 739 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 PLTPP55058 493 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 CCDC15Q0P6D6 951 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 HERC4Q5GLZ8 1057 aaPredicted RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 EPM2AIP1Q7L775 607 aaPredicted RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 NELFCDQ8IXH7 590 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 SAAL1Q96ER3 474 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 RXFP1Q9HBX9 757 aa12.19□□□□□ -0.46
GINS3-202ENST00000328514 MTRF1LQ9UGC7 380 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
GINS3-202ENST00000328514 E7ENQ6 273 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 ABLIM1O14639 778 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 RASGRF2O14827 1237 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 RIPK2O43353 540 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 DIAPH2O60879 1101 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 PHF2O75151 1096 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 GGPS1O95749 300 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 CTNNA2P26232 953 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 GCKP35557 465 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 EVA1CP58658 441 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 C1QTNF8P60827 252 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 BMT2Q1RMZ1 405 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 APLFQ8IW19 511 aaPredicted RBP12.18□□□□□ -0.46
GINS3-202ENST00000328514 TEX9Q8N6V9 391 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 ZNF784Q8NCA9 323 aaPredicted RBP12.18□□□□□ -0.46
GINS3-202ENST00000328514 LNX1Q8TBB1 728 aaPredicted RBP12.18□□□□□ -0.46
GINS3-202ENST00000328514 SLC35G2Q8TBE7 412 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 KLHL29Q96CT2 875 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
GINS3-202ENST00000328514 SH3GL3Q99963 347 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 TRIM31Q9BZY9 425 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 CPVLQ9H3G5 476 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 SEMA4AQ9H3S1 761 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 ERVK-5Q9HDB9 667 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 ARL2BPQ9Y2Y0 163 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 SYNGAP1Q96PV0 1343 aa12.18□□□□□ -0.46
GINS3-202ENST00000328514 NAV1Q8NEY1 1877 aa12.17□□□□□ -0.46
GINS3-202ENST00000328514 KRT16P08779 473 aa12.17□□□□□ -0.46
GINS3-202ENST00000328514 ATP2A2P16615 1042 aaKnown RBP12.17□□□□□ -0.46
GINS3-202ENST00000328514 STAT1P42224 750 aa12.17□□□□□ -0.46
GINS3-202ENST00000328514 MSH2P43246 934 aa12.17□□□□□ -0.46
GINS3-202ENST00000328514 CLK2P49760 499 aaKnown RBP12.17□□□□□ -0.46
GINS3-202ENST00000328514 DIXDC1Q155Q3 683 aa12.17□□□□□ -0.46
GINS3-202ENST00000328514 KNOP1Q1ED39 458 aaKnown RBP12.17□□□□□ -0.46
GINS3-202ENST00000328514 USP17L2Q6R6M4 530 aa12.17□□□□□ -0.46
GINS3-202ENST00000328514 U2AF1L4Q8WU68 220 aaKnown RBP12.17□□□□□ -0.46
GINS3-202ENST00000328514 GLG1Q92896 1179 aa12.17□□□□□ -0.46
GINS3-202ENST00000328514 SLC35C1Q96A29 364 aa12.17□□□□□ -0.46
GINS3-202ENST00000328514 ADAM22Q9P0K1 906 aa12.17□□□□□ -0.46
GINS3-202ENST00000328514 TLDC2A0PJX2 215 aa12.17□□□□□ -0.46
GINS3-202ENST00000328514 MIF4GDA9UHW6 222 aaKnown RBP12.17□□□□□ -0.46
GINS3-202ENST00000328514 PDE6BP35913 854 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms