RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 PTPN21Q16825 1174 aa5.3□□□□□ -1.56
SKP1-201ENST00000328392 SYDE2Q5VT97 1194 aa5.3□□□□□ -1.56
SKP1-201ENST00000328392 PRAMEF9Q5VWM5 478 aa5.3□□□□□ -1.56
SKP1-201ENST00000328392 LRSAM1Q6UWE0 723 aa5.3□□□□□ -1.56
SKP1-201ENST00000328392 ZNF496Q96IT1 587 aaPredicted RBP5.3□□□□□ -1.56
SKP1-201ENST00000328392 TUBGCP5Q96RT8 1024 aa5.3□□□□□ -1.56
SKP1-201ENST00000328392 AMNQ9BXJ7 453 aa5.3□□□□□ -1.56
SKP1-201ENST00000328392 PUS7LQ9H0K6 701 aaKnown RBP5.3□□□□□ -1.56
SKP1-201ENST00000328392 AASDHPPTQ9NRN7 309 aa5.3□□□□□ -1.56
SKP1-201ENST00000328392 EDARQ9UNE0 448 aa5.3□□□□□ -1.56
SKP1-201ENST00000328392 GABRDO14764 452 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 ZNF888P0CJ79 500 aaPredicted RBP5.29□□□□□ -1.56
SKP1-201ENST00000328392 CD40P25942 277 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 CSF2RBP32927 897 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 PPP2CBP62714 309 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 PPP2CAP67775 309 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 IL13RA1P78552 427 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 SLC6A3Q01959 620 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 PDCD1Q15116 288 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 TTF1Q15361 905 aaPredicted RBP5.29□□□□□ -1.56
SKP1-201ENST00000328392 SPATS1Q496A3 300 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 PGM2L1Q6PCE3 622 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 RASSF3Q86WH2 238 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 C7orf31Q8N865 590 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 AJUBAQ96IF1 538 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 LOXL4Q96JB6 756 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 KATNBL1Q9H079 304 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 INCENPQ9NQS7 918 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 TYW1Q9NV66 732 aaKnown RBP5.29□□□□□ -1.56
SKP1-201ENST00000328392 GALNT8Q9NY28 637 aa5.29□□□□□ -1.56
SKP1-201ENST00000328392 THRAP3Q9Y2W1 955 aaKnown RBP5.29□□□□□ -1.56
SKP1-201ENST00000328392 WASHC2AQ641Q2 1341 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 UBA6A0AVT1 1052 aaPredicted RBP5.28□□□□□ -1.56
SKP1-201ENST00000328392 GPR42O15529 346 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 H2AFYO75367 372 aaKnown RBP5.28□□□□□ -1.56
SKP1-201ENST00000328392 CNOT4O95628 575 aaKnown RBP5.28□□□□□ -1.56
SKP1-201ENST00000328392 CCND1P24385 295 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 ADCY8P40145 1251 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 MAGEA10P43363 369 aaPredicted RBP5.28□□□□□ -1.56
SKP1-201ENST00000328392 RGS3P49796 1198 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 EPHB4P54760 987 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 CT83Q5H943 113 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 CCDC62Q6P9F0 684 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 GLB1LQ6UWU2 654 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 ARHGEF18Q6ZSZ5 1173 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 PLEKHH3Q7Z736 793 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 RALYLQ86SE5 291 aaKnown RBP5.28□□□□□ -1.56
SKP1-201ENST00000328392 GGNQ86UU5 652 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 ZNF610Q8N9Z0 462 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 SCYL1Q96KG9 808 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 C16orf92Q96LL3 132 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 C8orf49Q96NF6 230 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 MYL10Q9BUA6 226 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 ZDHHC5Q9C0B5 715 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 JADE2Q9NQC1 790 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 SMPD4Q9NXE4 827 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 ST6GALNAC2Q9UJ37 374 aa5.28□□□□□ -1.56
SKP1-201ENST00000328392 CNOT11Q9UKZ1 510 aaKnown RBP5.28□□□□□ -1.56
SKP1-201ENST00000328392 TNKSO95271 1327 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 NPEPPSL1A6NEC2 478 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 XPOTO43592 962 aaKnown RBP5.27□□□□□ -1.57
SKP1-201ENST00000328392 MARCH6O60337 910 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 LPLP06858 475 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 ADRB1P08588 477 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 SDHAP31040 664 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 ERVK-21P61565 698 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 HERVK_113P62684 666 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 ADAM17P78536 824 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 TOP3AQ13472 1001 aaPredicted RBP5.27□□□□□ -1.57
SKP1-201ENST00000328392 ICAM4Q14773 271 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 NOLC1Q14978 699 aaKnown RBP eCLIP5.27□□□□□ -1.57
SKP1-201ENST00000328392 ACAP2Q15057 778 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 ZNF827Q17R98 1081 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 WDR72Q3MJ13 1102 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 UNQ6494/PRO21346Q6UXR6 183 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 FRMD7Q6ZUT3 714 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 ZBTB46Q86UZ6 589 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 WDR48Q8TAF3 677 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 FERMT2Q96AC1 680 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 FOXRED1Q96CU9 486 aaPredicted RBP5.27□□□□□ -1.57
SKP1-201ENST00000328392 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 QRSL1Q9H0R6 528 aaKnown RBP5.27□□□□□ -1.57
SKP1-201ENST00000328392 MEGF9Q9H1U4 602 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 MAGEL2Q9UJ55 1249 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 CDC42EP3Q9UKI2 254 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 EID1Q9Y6B2 187 aa5.27□□□□□ -1.57
SKP1-201ENST00000328392 GOLGA6L22H0YM25 854 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 PARNO95453 639 aaKnown RBP5.26□□□□□ -1.57
SKP1-201ENST00000328392 POLD1P28340 1107 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 ECE1P42892 770 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 FNTBP49356 437 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 RAB27AP51159 221 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 NEK2P51955 445 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 PHC1P78364 1004 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 CCT2P78371 535 aaKnown RBP5.26□□□□□ -1.57
SKP1-201ENST00000328392 CD83Q01151 205 aa5.26□□□□□ -1.57
SKP1-201ENST00000328392 KLF1Q13351 362 aaPredicted RBP5.26□□□□□ -1.57
SKP1-201ENST00000328392 LRRC32Q14392 662 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms