RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 LONRF1Q17RB8 773 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 MCF2L2Q86YR7 1114 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 SMARCAL1Q9NZC9 954 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 H0YC42 278 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 GTF2IP78347 998 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 TMC4Q7Z404 712 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 PPHLN1Q8NEY8 458 aaKnown RBP17.54■□□□□ 0.4
SMAD3-201ENST00000327367 AMACRQ9UHK6 382 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 TMA7Q9Y2S6 64 aaKnown RBP17.54■□□□□ 0.4
SMAD3-201ENST00000327367 ADGRL1O94910 1474 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 PRR23D1E9PI22 279 aaPredicted RBP17.54■□□□□ 0.4
SMAD3-201ENST00000327367 AKAP10O43572 662 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 ESRRBO95718 433 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 SERPINB2P05120 415 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 PRR23D2P0DMB1 279 aaPredicted RBP17.54■□□□□ 0.4
SMAD3-201ENST00000327367 TBL3Q12788 808 aaKnown RBP17.54■□□□□ 0.4
SMAD3-201ENST00000327367 RWDD4Q6NW29 188 aaKnown RBP17.54■□□□□ 0.4
SMAD3-201ENST00000327367 TEX2Q8IWB9 1127 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 SEC24CP53992 1094 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 DDIASQ8IXT1 998 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 OR9Q1Q8NGQ5 310 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 BATF3Q9NR55 127 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 DNAJC12Q9UKB3 198 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 LINC00854A0A1B0GVQ3 168 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 DRP2Q13474 957 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 MTRQ99707 1265 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 THTPAQ9BU02 230 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 PLB1Q6P1J6 1458 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 KPNA7A9QM74 516 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 IGF2BP3O00425 579 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMAD3-201ENST00000327367 DLGAP3O95886 979 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 IMPG1Q17R60 797 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 GALNT17Q6IS24 598 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 ZNF746Q6NUN9 644 aaPredicted RBP17.53■□□□□ 0.4
SMAD3-201ENST00000327367 TEKT4Q8WW24 435 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 BRD8Q9H0E9 1235 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 SARS2Q9NP81 518 aaKnown RBP17.53■□□□□ 0.4
SMAD3-201ENST00000327367 PLA2G4BP0C869 781 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 COQ7Q99807 217 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 RBBP7Q16576 425 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 CCDC103Q8IW40 242 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 PIGSQ96S52 555 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 CCT7Q99832 543 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 ARL2BPQ9Y2Y0 163 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 ADGRG1Q9Y653 693 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 PCDH11XQ9BZA7 1347 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 PCDH11YQ9BZA8 1340 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 E2F8A0AVK6 867 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 PYGLP06737 847 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 PKD2L2Q9NZM6 624 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 CNOT8Q9UFF9 292 aaKnown RBP17.53■□□□□ 0.4
SMAD3-201ENST00000327367 SYNGAP1Q96PV0 1343 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 PTPRKQ15262 1439 aa17.53■□□□□ 0.4
SMAD3-201ENST00000327367 SNX2O60749 519 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 ZSCAN20P17040 1043 aaPredicted RBP17.52■□□□□ 0.4
SMAD3-201ENST00000327367 GRK2P25098 689 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 MXI1P50539 228 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 CTSWP56202 376 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 LBRQ14739 615 aaKnown RBP17.52■□□□□ 0.4
SMAD3-201ENST00000327367 KLHL38Q2WGJ6 581 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 RESP18Q5W5W9 173 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 PNMA2Q9UL42 364 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 BLMP54132 1417 aaPredicted RBP17.52■□□□□ 0.4
SMAD3-201ENST00000327367 TCP10L2B9ZVM9 353 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 KRT38O76015 456 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 CPA2P48052 419 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 SNAP25P60880 206 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 TRAPPC3LQ5T215 181 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 RPS6KC1Q96S38 1066 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 PUS3Q9BZE2 481 aaKnown RBP17.52■□□□□ 0.4
SMAD3-201ENST00000327367 PDE5AO76074 875 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 XPAP23025 273 aaPredicted RBP17.52■□□□□ 0.4
SMAD3-201ENST00000327367 LAMB3Q13751 1172 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 PDXDC1Q6P996 788 aa17.52■□□□□ 0.4
SMAD3-201ENST00000327367 GFM2Q969S9 779 aaKnown RBP17.52■□□□□ 0.4
SMAD3-201ENST00000327367 PRKAB2O43741 272 aa17.52■□□□□ 0.39
SMAD3-201ENST00000327367 DYNLL1P63167 89 aaKnown RBP17.52■□□□□ 0.39
SMAD3-201ENST00000327367 CTTNQ14247 550 aaKnown RBP17.52■□□□□ 0.39
SMAD3-201ENST00000327367 CDR2LQ86X02 465 aaPredicted RBP17.52■□□□□ 0.39
SMAD3-201ENST00000327367 ENO3P13929 434 aaPredicted RBP17.52■□□□□ 0.39
SMAD3-201ENST00000327367 SLC9A5Q14940 896 aa17.52■□□□□ 0.39
SMAD3-201ENST00000327367 MRPL11Q9Y3B7 192 aaKnown RBP17.52■□□□□ 0.39
SMAD3-201ENST00000327367 UBE4BO95155 1302 aa17.52■□□□□ 0.39
SMAD3-201ENST00000327367 GAP43P17677 238 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 IL10P22301 178 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 S100A5P33763 92 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 CCDC137Q6PK04 289 aaKnown RBP17.51■□□□□ 0.39
SMAD3-201ENST00000327367 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.51■□□□□ 0.392e-9■□□□□ 10.6
SMAD3-201ENST00000327367 NUP85Q9BW27 656 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 NGRNQ9NPE2 291 aaKnown RBP17.51■□□□□ 0.39
SMAD3-201ENST00000327367 V9GYQ6 96 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 FAM180AQ6UWF9 173 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 ERP27Q96DN0 273 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 SMAD5Q99717 465 aaKnown RBP17.51■□□□□ 0.39
SMAD3-201ENST00000327367 HPCAL4Q9UM19 191 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 LAD1O00515 517 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 SERPINB1P30740 379 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 ARPP19P56211 112 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 CCDC142Q17RM4 750 aa17.51■□□□□ 0.39
SMAD3-201ENST00000327367 TRIM10Q9UDY6 481 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms