RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 AJAP1Q9UKB5 411 aaPredicted RBP15.83■□□□□ 0.12
SSBP3-201ENST00000326956 PPP1R9AQ9ULJ8 1098 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 CNTNAP4Q9C0A0 1308 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 RPS6KA4O75676 772 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 CYP4A11Q02928 519 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 DHX34Q14147 1143 aaKnown RBP15.83■□□□□ 0.12
SSBP3-201ENST00000326956 KIAA1755Q5JYT7 1200 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 DPY19L2P1Q6NXN4 242 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 FAM186BQ8IYM0 893 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 RPGRQ92834 1020 aaKnown RBP15.83■□□□□ 0.12
SSBP3-201ENST00000326956 STMN4Q9H169 189 aaPredicted RBP15.83■□□□□ 0.12
SSBP3-201ENST00000326956 SIX2Q9NPC8 291 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 NR2E1Q9Y466 385 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 DNAJC8O75937 253 aaPredicted RBP15.82■□□□□ 0.12
SSBP3-201ENST00000326956 ZBTB48P10074 688 aaPredicted RBP15.82■□□□□ 0.12
SSBP3-201ENST00000326956 PSMC2P35998 433 aaKnown RBP15.82■□□□□ 0.12
SSBP3-201ENST00000326956 DRAP1Q14919 205 aaPredicted RBP15.82■□□□□ 0.12
SSBP3-201ENST00000326956 CCDC63Q8NA47 563 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 TBC1D22AQ8WUA7 517 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 BHMT2Q9H2M3 363 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 GGA1Q9UJY5 639 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 DNAJC12Q9UKB3 198 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 GTPBP10A4D1E9 387 aaKnown RBP15.82■□□□□ 0.12
SSBP3-201ENST00000326956 SHBGP04278 402 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 C6orf118Q5T5N4 469 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 DUPD1Q68J44 220 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 JAMLQ86YT9 394 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 FMNL3Q8IVF7 1028 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 LNX1Q8TBB1 728 aaPredicted RBP15.82■□□□□ 0.12
SSBP3-201ENST00000326956 AZI2Q9H6S1 392 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 SERPINB13Q9UIV8 391 aa15.82■□□□□ 0.12
SSBP3-201ENST00000326956 FAM13AO94988 1023 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 RPA1P27694 616 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 WLSQ5T9L3 541 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 UHMK1Q8TAS1 419 aaKnown RBP15.81■□□□□ 0.12
SSBP3-201ENST00000326956 ATP8B4Q8TF62 1192 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 DYDC1Q8WWB3 177 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 STK33Q9BYT3 514 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 TAOK3Q9H2K8 898 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
SSBP3-201ENST00000326956 RSPH10B2B2RC85 870 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 F8W031 263 aaPredicted RBP15.81■□□□□ 0.12
SSBP3-201ENST00000326956 NUDT17P0C025 328 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 RSPH10BP0C881 870 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 GBP2P32456 591 aaPredicted RBP15.81■□□□□ 0.12
SSBP3-201ENST00000326956 GPSM2P81274 684 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 POU5F1Q01860 360 aaKnown RBP15.81■□□□□ 0.12
SSBP3-201ENST00000326956 ADCY2Q08462 1091 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 PLS1Q14651 629 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 QRICH1Q2TAL8 776 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 PNMA8AQ86V59 439 aaPredicted RBP15.81■□□□□ 0.12
SSBP3-201ENST00000326956 UBL4BQ8N7F7 174 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 FBXO25Q8TCJ0 367 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 PGM2Q96G03 612 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 FAM163AQ96GL9 167 aaPredicted RBP15.81■□□□□ 0.12
SSBP3-201ENST00000326956 ELAC2Q9BQ52 826 aaKnown RBP15.81■□□□□ 0.12
SSBP3-201ENST00000326956 NENFQ9UMX5 172 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 STK24Q9Y6E0 443 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 DDX60LQ5H9U9 1706 aaKnown RBP15.81■□□□□ 0.12
SSBP3-201ENST00000326956 PLIN4Q96Q06 1357 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 ATP2B4P23634 1241 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 ARHGAP4P98171 946 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 SLC29A2Q14542 456 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 ARHGAP44Q17R89 818 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 EPM2AIP1Q7L775 607 aaPredicted RBP15.81■□□□□ 0.12
SSBP3-201ENST00000326956 MAGEC3Q8TD91 643 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 TCP11Q8WWU5 503 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 TBC1D31Q96DN5 1066 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 PARP2Q9UGN5 583 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 SUFUQ9UMX1 484 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 RABGAP1Q9Y3P9 1069 aa15.81■□□□□ 0.12
SSBP3-201ENST00000326956 ASTN1O14525 1302 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 TMEM110-MUSTN1A8MSY1 372 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 OPLAHO14841 1288 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 DDX3YO15523 660 aaKnown RBP15.8■□□□□ 0.12
SSBP3-201ENST00000326956 KIF1CO43896 1103 aaKnown RBP15.8■□□□□ 0.12
SSBP3-201ENST00000326956 CLTAP09496 248 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 HOXD13P35453 343 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 ZNF76P36508 570 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 IFNAR2P48551 515 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 MAPK7Q13164 816 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 HS2ST1Q7LGA3 356 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 LRRC34Q8IZ02 419 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 MYCT1Q8N699 235 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 LRRC4CQ9HCJ2 640 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 DONSONQ9NYP3 566 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 TMOD4Q9NZQ9 345 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 CTTNBP2NLQ9P2B4 639 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 NCANO14594 1321 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 SFI1A8K8P3 1242 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 ASAP2O43150 1006 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 C21orf2O43822 256 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 AGTP01019 485 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 GBP1P32455 592 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 TAOK1Q7L7X3 1001 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 CNBD1Q8NA66 436 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 FRMD4BQ9Y2L6 1034 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 DAGLAQ9Y4D2 1042 aa15.8■□□□□ 0.12
SSBP3-201ENST00000326956 ATAD5Q96QE3 1844 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 CYP3A7-CYP3A51PA0A087WV96 503 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms