RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 HADHQ16836 314 aaKnown RBP15.87■□□□□ 0.13
TCOF1-201ENST00000323668 KLHDC7AQ5VTJ3 777 aa15.87■□□□□ 0.13
TCOF1-201ENST00000323668 PADI6Q6TGC4 694 aa15.87■□□□□ 0.13
TCOF1-201ENST00000323668 PICK1Q9NRD5 415 aa15.87■□□□□ 0.13
TCOF1-201ENST00000323668 CNOT8Q9UFF9 292 aaKnown RBP15.87■□□□□ 0.13
TCOF1-201ENST00000323668 PCDHB4Q9Y5E5 795 aa15.87■□□□□ 0.13
TCOF1-201ENST00000323668 PFASO15067 1338 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 CLRN2A0PK11 232 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 SLC26A4O43511 780 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 FAM107AO95990 144 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 RFX1P22670 979 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 PIK3CAP42336 1068 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 PEX3P56589 373 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 TMED2Q15363 201 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 CCDC137Q6PK04 289 aaKnown RBP15.86■□□□□ 0.13
TCOF1-201ENST00000323668 CDAN1Q8IWY9 1227 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 PAF1Q8N7H5 531 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 SLC35G2Q8TBE7 412 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 NAGPAQ9UK23 515 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 PIK3C2AO00443 1686 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 GNPTABQ3T906 1256 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 KIAA1755Q5JYT7 1200 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 ATP6V0A1Q93050 837 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 MTMR8Q96EF0 704 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 CFAP57Q96MR6 1250 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 IL17RBQ9NRM6 502 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 ANAPC7Q9UJX3 599 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 MST1RQ04912 1400 aa15.86■□□□□ 0.13
TCOF1-201ENST00000323668 TBX3O15119 743 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 VAMP7P51809 220 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 PTGISQ16647 500 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 PHLDB2Q86SQ0 1253 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 ZNF507Q8TCN5 953 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 HDAC7Q8WUI4 952 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 CASKIN2Q8WXE0 1202 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 TMOD4Q9NZQ9 345 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 EXOC1LA0A1B0GW35 172 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 KRT19P08727 400 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 ACTN3Q08043 901 aaPredicted RBP15.85■□□□□ 0.13
TCOF1-201ENST00000323668 TRIM68Q6AZZ1 485 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 KDM7AQ6ZMT4 941 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 N4BP2L2Q92802 583 aaPredicted RBP15.85■□□□□ 0.13
TCOF1-201ENST00000323668 CEP170P1Q96L14 293 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 TRIM51Q9BSJ1 452 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 SERPINA10Q9UK55 444 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 LRRIQ4A6NIV6 560 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 VEGFAP15692 232 aaPredicted RBP15.85■□□□□ 0.13
TCOF1-201ENST00000323668 POLR2BP30876 1174 aaKnown RBP15.85■□□□□ 0.13
TCOF1-201ENST00000323668 BRDTQ58F21 947 aaPredicted RBP15.85■□□□□ 0.13
TCOF1-201ENST00000323668 LINC00116Q8NCU8 138 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 VCXQ9H320 206 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 PNMA2Q9UL42 364 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 SLC10A5Q5PT55 438 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 AGBL2Q5U5Z8 902 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 CREG2Q8IUH2 290 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 SUGT1Q9Y2Z0 365 aa15.85■□□□□ 0.13
TCOF1-201ENST00000323668 FRMD3A2A2Y4 597 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 MYBP10242 640 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 CYP11B2P19099 503 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 RPA1P27694 616 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 TMOD1P28289 359 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 TTLL12Q14166 644 aaPredicted RBP15.84■□□□□ 0.13
TCOF1-201ENST00000323668 RC3H1Q5TC82 1133 aaKnown RBP15.84■□□□□ 0.13
TCOF1-201ENST00000323668 WDR59Q6PJI9 974 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 RNF207Q6ZRF8 634 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 FAM160B2Q86V87 743 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 TXNRD3Q86VQ6 643 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 METTL13Q8N6R0 699 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 ZNF564Q8TBZ8 553 aaPredicted RBP15.84■□□□□ 0.13
TCOF1-201ENST00000323668 MORC4Q8TE76 937 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 CAVIN3Q969G5 261 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 WNT8AQ9H1J5 351 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 SUCLA2Q9P2R7 463 aaPredicted RBP15.84■□□□□ 0.13
TCOF1-201ENST00000323668 UBR1Q8IWV7 1749 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 ABL1P00519 1130 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 FMO5P49326 533 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 YWHAEP62258 255 aaKnown RBP15.84■□□□□ 0.13
TCOF1-201ENST00000323668 CFAP157Q5JU67 520 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 AGPAT1Q99943 283 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 GLI1P08151 1106 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 HSD17B3P37058 310 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 MUM1Q2TAK8 710 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 BANK1Q8NDB2 785 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 TLR10Q9BXR5 811 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 ATRNO75882 1429 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 GCKP35557 465 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 POLGP54098 1239 aaPredicted RBP15.84■□□□□ 0.13
TCOF1-201ENST00000323668 CCHCR1Q8TD31 782 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 CYFIP2Q96F07 1278 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 TXLNGQ9NUQ3 528 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 EMSYQ7Z589 1322 aa15.84■□□□□ 0.13
TCOF1-201ENST00000323668 SGK1O00141 431 aa15.83■□□□□ 0.13
TCOF1-201ENST00000323668 PARP9Q8IXQ6 854 aa15.83■□□□□ 0.13
TCOF1-201ENST00000323668 TAB3Q8N5C8 712 aaPredicted RBP15.83■□□□□ 0.13
TCOF1-201ENST00000323668 TBC1D16Q8TBP0 767 aa15.83■□□□□ 0.13
TCOF1-201ENST00000323668 CNKSR1Q969H4 720 aa15.83■□□□□ 0.13
TCOF1-201ENST00000323668 NUP85Q9BW27 656 aa15.83■□□□□ 0.13
TCOF1-201ENST00000323668 PITPNM3Q9BZ71 974 aa15.83■□□□□ 0.13
TCOF1-201ENST00000323668 APEX2Q9UBZ4 518 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms