RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 PCDHB7Q9Y5E2 793 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 MAGEB2O15479 319 aa13.91□□□□□ -0.18
TPM3-204ENST00000323144 CSDE1O75534 798 aaKnown RBP13.91□□□□□ -0.18
TPM3-204ENST00000323144 CTDNEP1O95476 244 aa13.91□□□□□ -0.18
TPM3-204ENST00000323144 NRIP1P48552 1158 aa13.91□□□□□ -0.18
TPM3-204ENST00000323144 NDUFV1P49821 464 aa13.91□□□□□ -0.18
TPM3-204ENST00000323144 TBC1D8BQ0IIM8 1120 aa13.91□□□□□ -0.18
TPM3-204ENST00000323144 SMAD4Q13485 552 aaKnown RBP13.91□□□□□ -0.18
TPM3-204ENST00000323144 EARS2Q5JPH6 523 aaKnown RBP13.91□□□□□ -0.18
TPM3-204ENST00000323144 TMEM31Q5JXX7 168 aa13.91□□□□□ -0.18
TPM3-204ENST00000323144 CLLU1OSQ5K130 101 aa13.91□□□□□ -0.18
TPM3-204ENST00000323144 VN1R2Q8NFZ6 395 aa13.91□□□□□ -0.18
TPM3-204ENST00000323144 WRAP73Q9P2S5 460 aaPredicted RBP13.91□□□□□ -0.18
TPM3-204ENST00000323144 DDX25Q9UHL0 483 aaKnown RBP13.91□□□□□ -0.18
TPM3-204ENST00000323144 CYP3A7-CYP3A51PA0A087WV96 503 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 EML1O00423 815 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 FGF18O76093 207 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 NEFLP07196 543 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 DARSP14868 501 aaKnown RBP13.9□□□□□ -0.18
TPM3-204ENST00000323144 CYP3A7P24462 503 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 LETM2Q2VYF4 491 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 PUS10Q3MIT2 529 aaKnown RBP13.9□□□□□ -0.18
TPM3-204ENST00000323144 MOXD1Q6UVY6 613 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 LRRC55Q6ZSA7 311 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 KRT25Q7Z3Z0 450 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 RBM23Q86U06 439 aaKnown RBP13.9□□□□□ -0.18
TPM3-204ENST00000323144 ECHDC2Q86YB7 292 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 THNSL1Q8IYQ7 743 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 LRRC43Q8N309 656 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 RNF169Q8NCN4 708 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 RDM1Q8NG50 284 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 NLRP7Q8WX94 980 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 MSLNLQ96KJ4 702 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 C22orf23Q9BZE7 217 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 ATP6V0A4Q9HBG4 840 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 BMP2KQ9NSY1 1161 aaPredicted RBP13.9□□□□□ -0.18
TPM3-204ENST00000323144 TYW1Q9NV66 732 aaKnown RBP13.9□□□□□ -0.18
TPM3-204ENST00000323144 CLEC1BQ9P126 229 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 CD207Q9UJ71 328 aa13.9□□□□□ -0.18
TPM3-204ENST00000323144 PLXNA3P51805 1871 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 PI4K2BG5E9Z4 385 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 PFKFB2O60825 505 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 EIF4BP23588 611 aaKnown RBP13.89□□□□□ -0.19
TPM3-204ENST00000323144 FOSBP53539 338 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 AK2P54819 239 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 SMAD2Q15796 467 aaKnown RBP13.89□□□□□ -0.19
TPM3-204ENST00000323144 NAALADL2Q58DX5 795 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 ODR4Q5SWX8 454 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 PLPP4Q5VZY2 271 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 CPLX2Q6PUV4 134 aaKnown RBP13.89□□□□□ -0.19
TPM3-204ENST00000323144 ANO5Q75V66 913 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 ADHFE1Q8IWW8 467 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 EFHBQ8N7U6 833 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 CASD1Q96PB1 797 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 TMEM117Q9H0C3 514 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 SLKQ9H2G2 1235 aaPredicted RBP13.89□□□□□ -0.19
TPM3-204ENST00000323144 KCNMB3Q9NPA1 279 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 TLR9Q9NR96 1032 aa13.89□□□□□ -0.19
TPM3-204ENST00000323144 TDRD15B5MCY1 1934 aaKnown RBP13.88□□□□□ -0.19
TPM3-204ENST00000323144 A0A087WZ62 844 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 CCDC194A0A1B0GVG4 234 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 C19orf67A6NJJ6 358 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 WNT7AO00755 349 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 FSCN2O14926 492 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 PER2O15055 1255 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 CDKL5O76039 1030 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 LAG3P18627 525 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 TMOD1P28289 359 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 ERVFC1P60507 584 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 FAM189BP81408 668 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 ST3GAL1Q11201 340 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 NR5A1Q13285 461 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 ADAM15Q13444 863 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 XKR3Q5GH77 459 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 PIK3AP1Q6ZUJ8 805 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 NEK8Q86SG6 692 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 ZNF598Q86UK7 904 aaKnown RBP13.88□□□□□ -0.19
TPM3-204ENST00000323144 KSR1Q8IVT5 923 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 NECAB1Q8N987 351 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
TPM3-204ENST00000323144 SMRP1Q8NCR6 262 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 HELQQ8TDG4 1101 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 NLRP4Q96MN2 994 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 FDXACB1Q9BRP7 624 aaPredicted RBP13.88□□□□□ -0.19
TPM3-204ENST00000323144 ELAC1Q9H777 363 aaKnown RBP13.88□□□□□ -0.19
TPM3-204ENST00000323144 NRBP2Q9NSY0 501 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 PRKAG3Q9UGI9 489 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 PCDHB12Q9Y5F1 795 aa13.88□□□□□ -0.19
TPM3-204ENST00000323144 C2orf16Q68DN1 1984 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 IGKV6-21A0A0C4DH24 114 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 MEIS3P2A8K0S8 358 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 NCK2O43639 380 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 PLA2G5P39877 138 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 NPEPPSP55786 919 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 PPP2R5CQ13362 524 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 LONRF3Q496Y0 759 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 GALNT17Q6IS24 598 aa13.87□□□□□ -0.19
TPM3-204ENST00000323144 FAM177A1Q8N128 213 aaPredicted RBP13.87□□□□□ -0.19
TPM3-204ENST00000323144 HAS1Q92839 578 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms