RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 FOXP2O15409 715 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 GGPS1O95749 300 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 ADCK1Q86TW2 530 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 TAGAPQ8N103 731 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 ZNF408Q9H9D4 720 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 SEL1LQ9UBV2 794 aa17.98■□□□□ 0.47
SMCHD1-201ENST00000320876 ZNF189O75820 626 aaPredicted RBP17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 ZMYM1Q5SVZ6 1142 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 SLFN13Q68D06 897 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 POLE3Q9NRF9 147 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 SENP1Q9P0U3 644 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 FNDC3AQ9Y2H6 1198 aaKnown RBP17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 CHRNA3P32297 505 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 SLFN12LQ6IEE8 588 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 PLD3Q8IV08 490 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 APOL6Q9BWW8 343 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 ADD3Q9UEY8 706 aaKnown RBP17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 BLOC1S6Q9UL45 172 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 ASAP2O43150 1006 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 KLC1Q07866 573 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 LRRC41Q15345 812 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 RWDD4Q6NW29 188 aaKnown RBP17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 SLC26A7Q8TE54 656 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 SH3GLB2Q9NR46 395 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 PJA2O43164 708 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 RPS8P62241 208 aaKnown RBP17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 DEPDC1Q5TB30 811 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 PLA2G4BP0C869 781 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 ARFIP2P53365 341 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 ACTN3Q08043 901 aaPredicted RBP17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 BTDP43251 543 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 INPP5AQ14642 412 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 THAP11Q96EK4 314 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 ADNPQ9H2P0 1102 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 BTG4Q9NY30 223 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 ERVV-2B6SEH9 535 aa17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 DDX5P17844 614 aaKnown RBP17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 HSPA9P38646 679 aaKnown RBP17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 KIF23Q02241 960 aaPredicted RBP17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 DDX42Q86XP3 938 aaKnown RBP eCLIP17.97■□□□□ 0.47
SMCHD1-201ENST00000320876 BCAMP50895 628 aa17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 DIABLOQ9NR28 239 aa17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 MORC2Q9Y6X9 1032 aaPredicted RBP17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 TMED10P49755 219 aaKnown RBP17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 CCDC15Q0P6D6 951 aa17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 ERICH1Q86X53 443 aa17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 KLHL8Q9P2G9 620 aaPredicted RBP17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 ADCK5Q3MIX3 580 aa17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 LRRC8EQ6NSJ5 796 aa17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 EAF2Q96CJ1 260 aaPredicted RBP17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 TBC1D4O60343 1298 aa17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 ZRANB2O95218 330 aaKnown RBP eCLIP17.96■□□□□ 0.473e-6■■■■□ 22
SMCHD1-201ENST00000320876 DAB2IPQ5VWQ8 1189 aa17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 TBC1D9BQ66K14 1250 aa17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 KRT27Q7Z3Y8 459 aa17.96■□□□□ 0.47
SMCHD1-201ENST00000320876 WBP4O75554 376 aaKnown RBP17.96■□□□□ 0.46
SMCHD1-201ENST00000320876 GSNP06396 782 aa17.96■□□□□ 0.46
SMCHD1-201ENST00000320876 HSPA1AP0DMV8 641 aaKnown RBP17.96■□□□□ 0.46
SMCHD1-201ENST00000320876 HSPA1BP0DMV9 641 aaKnown RBP17.96■□□□□ 0.46
SMCHD1-201ENST00000320876 GTF2IP78347 998 aa17.96■□□□□ 0.46
SMCHD1-201ENST00000320876 CDO1Q16878 200 aa17.96■□□□□ 0.46
SMCHD1-201ENST00000320876 PLEKHM3Q6ZWE6 761 aa17.96■□□□□ 0.46
SMCHD1-201ENST00000320876 MRGBPQ9NV56 204 aa17.96■□□□□ 0.46
SMCHD1-201ENST00000320876 NXF1Q9UBU9 619 aaKnown RBP17.96■□□□□ 0.46
SMCHD1-201ENST00000320876 PTPRKQ15262 1439 aa17.96■□□□□ 0.46
SMCHD1-201ENST00000320876 PPIP5K2O43314 1243 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 CD58P19256 250 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 GADL1Q6ZQY3 521 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 ATP11CQ8NB49 1132 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 RPF1Q9H9Y2 349 aaKnown RBP17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 PER1O15534 1290 aaPredicted RBP17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 DEFA1P59665 94 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 DEFA3P59666 94 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 KIAA1755Q5JYT7 1200 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 NUP85Q9BW27 656 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 ASCC2Q9H1I8 757 aaPredicted RBP17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 PCIF1Q9H4Z3 704 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 GNL1P36915 607 aaPredicted RBP17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 EIF4A1P60842 406 aaKnown RBP17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 PTK2BQ14289 1009 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 PTPN21Q16825 1174 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 NAALADL2Q58DX5 795 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 CEP170P1Q96L14 293 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 CDC42BPBQ9Y5S2 1711 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 MYH6P13533 1939 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 NCAPG2Q86XI2 1143 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 MPP6Q9NZW5 540 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 SRGAP2O75044 1071 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 DMC1Q14565 340 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 ADAMTS1Q9UHI8 967 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 LGALS16A8MUM7 142 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 FBXW4P57775 412 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 FOXD4Q12950 439 aaPredicted RBP17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 GJC2Q5T442 439 aaPredicted RBP17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 C7orf31Q8N865 590 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 GPBP1L1Q9HC44 474 aaPredicted RBP17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 KRT87PA6NCN2 255 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 E5RI56 91 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 PI4K2BG5E9Z4 385 aa17.95■□□□□ 0.46
SMCHD1-201ENST00000320876 GOLGA8MH3BSY2 632 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms