RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ETNK1Q9HBU6 452 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 ARHGEF10LQ9HCE6 1279 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 USP40Q9NVE5 1235 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 SWAP70Q9UH65 585 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 IGSF9BQ9UPX0 1349 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 SLC8A1P32418 973 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 STX2P32856 288 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 ASTE1Q2TB18 679 aaPredicted RBP15.36■□□□□ 0.05
PABPC1-201ENST00000318607 CCDC50Q8IVM0 306 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 CYP2W1Q8TAV3 490 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 SERPINA10Q9UK55 444 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 ZNF804BA4D1E1 1349 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 ORC4O43929 436 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 DLATP10515 647 aaKnown RBP15.36■□□□□ 0.05
PABPC1-201ENST00000318607 ECHS1P30084 290 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 MTMR3Q13615 1198 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 DRAP1Q14919 205 aaPredicted RBP15.36■□□□□ 0.05
PABPC1-201ENST00000318607 TAF11Q15544 211 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 BARGINQ6ZT62 677 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 RNF25Q96BH1 459 aaPredicted RBP15.36■□□□□ 0.05
PABPC1-201ENST00000318607 HOOK2Q96ED9 719 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 DDX3XO00571 662 aaKnown RBP eCLIP15.36■□□□□ 0.054e-56■■□□□ 12.8
PABPC1-201ENST00000318607 PON1P27169 355 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 KYNUQ16719 465 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 ARHGEF2Q92974 986 aaKnown RBP15.36■□□□□ 0.05
PABPC1-201ENST00000318607 C9orf72Q96LT7 481 aa15.36■□□□□ 0.05
PABPC1-201ENST00000318607 POC1B-GALNT4F8VUJ3 575 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 G3V3G9 751 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 RCAN1P53805 252 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 BIRC3Q13489 604 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 BYSLQ13895 437 aaKnown RBP15.35■□□□□ 0.05
PABPC1-201ENST00000318607 FIGNQ5HY92 759 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 DCAF8Q5TAQ9 597 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 ALG3Q92685 438 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 CCDC127Q96BQ5 260 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 DNAJC12Q9UKB3 198 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 JAMLQ86YT9 394 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 SLC30A5Q8TAD4 765 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 SLC20A1Q8WUM9 679 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 LMBR1Q8WVP7 490 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 SETDB2Q96T68 719 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 CUEDC2Q9H467 287 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 METTL5Q9NRN9 209 aaKnown RBP15.35■□□□□ 0.05
PABPC1-201ENST00000318607 USTQ9Y2C2 406 aa15.35■□□□□ 0.05
PABPC1-201ENST00000318607 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 GOLGA8IPA6NC78 632 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 GOLGA8JA6NMD2 632 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 TISP43B9A030 160 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 MED24O75448 989 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 NTSR2O95665 410 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 KRT16P08779 473 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 CDK17Q00537 523 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 CALCOCO2Q13137 446 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 NBPF20Q3BBV1 942 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 TBC1D9BQ66K14 1250 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 CCT6BQ92526 530 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 RNF14Q9UBS8 474 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 SUGT1Q9Y2Z0 365 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 PCDHGC5Q9Y5F6 944 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 TMEM120BA0PK00 339 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 ANKRD63C9JTQ0 380 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 PJA2O43164 708 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 ZYXQ15942 572 aaKnown RBP15.34■□□□□ 0.05
PABPC1-201ENST00000318607 SYCP2LQ5T4T6 812 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 CAPRIN2Q6IMN6 1127 aaKnown RBP15.34■□□□□ 0.05
PABPC1-201ENST00000318607 ISLR2Q6UXK2 745 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 PARD3BQ8TEW8 1205 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 PBKQ96KB5 322 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 RIC8AQ9NPQ8 531 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 C4AP0C0L4 1744 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 C4BP0C0L5 1744 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 CCDC169A6NNP5 214 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 H0YGN5 161 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 AP1G2O75843 785 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 MYL1P05976 194 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 AKR1B1P15121 316 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 C6orf89Q6UWU4 347 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 SPOCK2Q92563 424 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 REEP2Q9BRK0 252 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 RAB17Q9H0T7 212 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 MTRF1LQ9UGC7 380 aaKnown RBP15.34■□□□□ 0.05
PABPC1-201ENST00000318607 TTC7AQ9ULT0 858 aaPredicted RBP15.34■□□□□ 0.05
PABPC1-201ENST00000318607 SH3BP1Q9Y3L3 701 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 PCDHA1Q9Y5I3 950 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 NFS1Q9Y697 457 aa15.34■□□□□ 0.05
PABPC1-201ENST00000318607 ANKRD62A6NC57 917 aa15.33■□□□□ 0.05
PABPC1-201ENST00000318607 FAM13AO94988 1023 aa15.33■□□□□ 0.05
PABPC1-201ENST00000318607 TARSP26639 723 aaKnown RBP15.33■□□□□ 0.05
PABPC1-201ENST00000318607 ZNF131P52739 623 aa15.33■□□□□ 0.05
PABPC1-201ENST00000318607 MFSD14BQ5SR56 506 aa15.33■□□□□ 0.05
PABPC1-201ENST00000318607 CCDC137Q6PK04 289 aaKnown RBP15.33■□□□□ 0.05
PABPC1-201ENST00000318607 TRIM59Q8IWR1 403 aa15.33■□□□□ 0.05
PABPC1-201ENST00000318607 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.33■□□□□ 0.052e-6■■■□□ 15.6
PABPC1-201ENST00000318607 PVALEFA0A1B0GWK0 134 aa15.33■□□□□ 0.04
PABPC1-201ENST00000318607 EXOC3O60645 756 aa15.33■□□□□ 0.04
PABPC1-201ENST00000318607 HNRNPH3P31942 346 aaKnown RBP15.33■□□□□ 0.04
PABPC1-201ENST00000318607 LACTBP83111 547 aaPredicted RBP15.33■□□□□ 0.04
PABPC1-201ENST00000318607 IRF2BP2Q7Z5L9 587 aa15.33■□□□□ 0.04
PABPC1-201ENST00000318607 KLHL11Q9NVR0 708 aa15.33■□□□□ 0.04
PABPC1-201ENST00000318607 DNM3Q9UQ16 869 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms