RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 ANKRD42Q8N9B4 389 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 KCTD6Q8NC69 237 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 FAM71BQ8TC56 605 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 EPB41L5Q9HCM4 733 aa13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.81□□□□□ -0.29e-8■■■■■ 32.1
SH3PXD2A-201ENST00000315994 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SLC16A3O15427 465 aaKnown RBP13.81□□□□□ -0.2
SH3PXD2A-201ENST00000315994 RHOBTB3O94955 611 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 NFX1Q12986 1120 aaKnown RBP13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MFSD14CQ5VZR4 134 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ANKRD40Q6AI12 368 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 OR6B3Q8NGW1 331 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CABS1Q96KC9 395 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 EHD4Q9H223 541 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CIB2O75838 187 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 STAT5BP51692 787 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 EFNA5P52803 228 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 AP3M2P53677 418 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SLC12A6Q9UHW9 1150 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 KIAA0391O15091 583 aaKnown RBP13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 RWDD2BP57060 319 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 RPUSD2Q8IZ73 545 aaKnown RBP13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PFASO15067 1338 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 RNF40O75150 1001 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.26e-10■■■■□ 23.6
SH3PXD2A-201ENST00000315994 XKR3Q5GH77 459 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 BEST2Q8NFU1 509 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CDKL2Q92772 493 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 DGAT1O75907 488 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 NR3C2P08235 984 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TXNP10599 105 aaKnown RBP13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 KYAT1Q16773 422 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ADSSL1Q8N142 457 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TMEM35BQ8NCS4 154 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MGARPQ8TDB4 240 aa13.8□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TCRBV5S4A2TA0A5A2 114 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 POLRMTO00411 1230 aaKnown RBP13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TEX33O43247 280 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SLC25A27O95847 323 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ANXA13P27216 316 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 XRRA1Q6P2D8 792 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ENOSF1Q7L5Y1 443 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TXNRD3Q86VQ6 643 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 BBS5Q8N3I7 341 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TUBE1Q9UJT0 475 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SRGAP2BP0DMP2 458 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SNX1Q13596 522 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 KIAA1841Q6NSI8 718 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PHLDB2Q86SQ0 1253 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ELOA2Q8IYF1 753 aaPredicted RBP13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SCYL3Q8IZE3 742 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MXRA8Q9BRK3 442 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 EDEM3Q9BZQ6 932 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MKRN1Q9UHC7 482 aaKnown RBP13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TYW5A2RUC4 315 aaKnown RBP13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 LRRD1A4D1F6 860 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MAFGO15525 162 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GPC5P78333 572 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CHST13Q8NET6 341 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ADAM22Q9P0K1 906 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 NPHP3-ACAD11A0A0J9YXS1 232 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MIF4GDA9UHW6 222 aaKnown RBP13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CCDC62Q6P9F0 684 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CAPN12Q6ZSI9 719 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TAB3Q8N5C8 712 aaPredicted RBP13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 RIT2Q99578 217 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CALN1Q9BXU9 219 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MAD1L1Q9Y6D9 718 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SIGLEC1Q9BZZ2 1709 aa13.79□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PFDN6O15212 129 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ARHGAP25P42331 645 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TWF2Q6IBS0 349 aaKnown RBP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 C3orf67Q6ZVT6 689 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 VSIG1Q86XK7 387 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SAAL1Q96ER3 474 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PRMT6Q96LA8 375 aaPredicted RBP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MTFR1LQ9H019 292 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ANO9A1A5B4 782 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CALB1P05937 261 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GARSP41250 739 aaKnown RBP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 YWHAGP61981 247 aaKnown RBP eCLIP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GFPT1Q06210 699 aaPredicted RBP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TMEM270Q6UE05 265 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CYFIP1Q7L576 1253 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ADGRA1Q86SQ6 560 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TTC39CQ8N584 583 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 MYCBPQ99417 103 aaPredicted RBP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PARK7Q99497 189 aaKnown RBP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 NCAPGQ9BPX3 1015 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CNOT8Q9UFF9 292 aaKnown RBP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 IPO11Q9UI26 975 aaKnown RBP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 AGO2Q9UKV8 859 aaKnown RBP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TTC26A0AVF1 554 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PALMO75781 387 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 NMT1P30419 496 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms