RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 FUT4P22083 530 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 EPHX2P34913 555 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 DHX9Q08211 1270 aaKnown RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 KANK3Q6NY19 840 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZNF449Q6P9G9 518 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 SAPCD2Q86UD0 394 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZNF444Q8N0Y2 327 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 LRRC8CQ8TDW0 803 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 LARSQ9P2J5 1176 aaKnown RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 PI4KBQ9UBF8 816 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 SCAF8Q9UPN6 1271 aaKnown RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 ASTN2O75129 1339 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 A6NHS1 94 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 RGS16O15492 202 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 PRC1O43663 620 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 NPTXRO95502 500 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 CASP1P29466 404 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 MLH1P40692 756 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 RASA3Q14644 834 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 EAPPQ56P03 285 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 SFMBT2Q5VUG0 894 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 TYW1BQ6NUM6 668 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 FAM83AQ86UY5 434 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 APOBEC3FQ8IUX4 373 aaKnown RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 SLC44A5Q8NCS7 719 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 CENPKQ9BS16 269 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZNF180Q9UJW8 692 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 FAF1Q9UNN5 650 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 DDTLA6NHG4 134 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 KRT16P08779 473 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 VCAM1P19320 739 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 TUBP50607 506 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 BIRC3Q13489 604 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 RIPK1Q13546 671 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 SEPT6Q14141 434 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 CDC37Q16543 378 aaPredicted RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 CCNJLQ8IV13 435 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 LRRC34Q8IZ02 419 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 DDX50Q9BQ39 737 aaKnown RBP12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 TMEM39BQ9GZU3 492 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 DPH5Q9H2P9 285 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 MLXIPQ9HAP2 919 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 MLXIPLQ9NP71 852 aa12.61□□□□□ -0.39
LDLRAD3-201ENST00000315571 TSPY2A6NKD2 308 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 NVLO15381 856 aaKnown RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 ERFP50548 548 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 APBB1IPQ7Z5R6 666 aaPredicted RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 RAB17Q9H0T7 212 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 RANBP17Q9H2T7 1088 aaKnown RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 PNMA2Q9UL42 364 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 SNX12Q9UMY4 172 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 ATP8A1Q9Y2Q0 1164 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 SLCO1A2P46721 670 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 CDK8P49336 464 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 GNAQP50148 359 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 LACTB2Q53H82 288 aaPredicted RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 SHC4Q6S5L8 630 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 APLFQ8IW19 511 aaPredicted RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 WDR75Q8IWA0 830 aaKnown RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 MB21D2Q8IYB1 491 aaPredicted RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 DCPSQ96C86 337 aaKnown RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 RMDN2Q96LZ7 410 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 MMTAG2Q9BU76 263 aaKnown RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 ORC4O43929 436 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 GLI1P08151 1106 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 GSTA1P08263 222 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 CCNFP41002 786 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 MAGEA1P43355 309 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 MTIF2P46199 727 aaKnown RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZNF131P52739 623 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 COPB1P53618 953 aaKnown RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 ADCY1Q08828 1119 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 PAPD7Q5XG87 772 aaKnown RBP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 C16orf86Q6ZW13 317 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 MMGT1Q8N4V1 131 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 LACRTQ9GZZ8 138 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 TRIM33Q9UPN9 1127 aa12.6□□□□□ -0.39
LDLRAD3-201ENST00000315571 GFPT2O94808 682 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 CHN1P15882 459 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 XBP1P17861 261 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 NAT1P18440 290 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 CD151P48509 253 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 HIRAP54198 1017 aaPredicted RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 LRRC14Q15048 493 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 KCTD19Q17RG1 926 aaPredicted RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 USP50Q70EL3 339 aaPredicted RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 HS2ST1Q7LGA3 356 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 FOXP4Q8IVH2 680 aaPredicted RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 DTX3LQ8TDB6 740 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 NMD3Q96D46 503 aaKnown RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 TRIM47Q96LD4 638 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 PRMT1Q99873 361 aaKnown RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 NDST4Q9H3R1 872 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 TMA7Q9Y2S6 64 aaKnown RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 BAZ2AQ9UIF9 1905 aaKnown RBP12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 ROBO3Q96MS0 1386 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 NAV1Q8NEY1 1877 aa12.59□□□□□ -0.39
LDLRAD3-201ENST00000315571 TTC26A0AVF1 554 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms