RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 ZNF232Q9UNY5 417 aa13.21□□□□□ -0.29
EBF1-201ENST00000313708 RPS6KL1Q9Y6S9 549 aa13.21□□□□□ -0.29
EBF1-201ENST00000313708 TNKSO95271 1327 aa13.21□□□□□ -0.29
EBF1-201ENST00000313708 ABCA6Q8N139 1617 aa13.21□□□□□ -0.3
EBF1-201ENST00000313708 GFPT2O94808 682 aa13.21□□□□□ -0.3
EBF1-201ENST00000313708 POLGP54098 1239 aaPredicted RBP13.21□□□□□ -0.3
EBF1-201ENST00000313708 MRPS9P82933 396 aaKnown RBP13.21□□□□□ -0.3
EBF1-201ENST00000313708 CC2D2BQ6DHV5 1058 aa13.21□□□□□ -0.3
EBF1-201ENST00000313708 TRIM67Q6ZTA4 783 aa13.21□□□□□ -0.3
EBF1-201ENST00000313708 GPKOWQ92917 476 aaPredicted RBP eCLIP13.21□□□□□ -0.3
EBF1-201ENST00000313708 CCDC124Q96CT7 223 aaKnown RBP13.21□□□□□ -0.3
EBF1-201ENST00000313708 ARHGAP20Q9P2F6 1191 aa13.21□□□□□ -0.3
EBF1-201ENST00000313708 PHTF1Q9UMS5 762 aa13.21□□□□□ -0.3
EBF1-201ENST00000313708 SLC12A4Q9UP95 1085 aa13.21□□□□□ -0.3
EBF1-201ENST00000313708 MYOM1P52179 1685 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 ENO1P06733 434 aaKnown RBP13.2□□□□□ -0.3
EBF1-201ENST00000313708 GALK1P51570 392 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 KDSRQ06136 332 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 ANKS1AQ92625 1134 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 GLG1Q92896 1179 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 UIMC1Q96RL1 719 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 ADAM33Q9BZ11 813 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 STK36Q9NRP7 1315 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 CDC42BPAQ5VT25 1732 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 A0A1W2PQJ5 194 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 HSPA6P17066 643 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
EBF1-201ENST00000313708 FBXO31Q5XUX0 539 aaPredicted RBP13.2□□□□□ -0.3
EBF1-201ENST00000313708 TRIM56Q9BRZ2 755 aaKnown RBP13.2□□□□□ -0.3
EBF1-201ENST00000313708 P4HA2O15460 535 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 PTPN4P29074 926 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 TRPC3Q13507 836 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 DCTN2Q13561 401 aaKnown RBP13.2□□□□□ -0.3
EBF1-201ENST00000313708 RABGAP1LQ5R372 815 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 ATP11CQ8NB49 1132 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 SYT15Q9BQS2 421 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 ERP44Q9BS26 406 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 THTPAQ9BU02 230 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 BLOC1S6Q9UL45 172 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 PLAGL2Q9UPG8 496 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 SALL1Q9NSC2 1324 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 KRT75O95678 551 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 DHX34Q14147 1143 aaKnown RBP13.2□□□□□ -0.3
EBF1-201ENST00000313708 SLC18A3Q16572 532 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 SPRED3Q2MJR0 410 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 CCDC137Q6PK04 289 aaKnown RBP13.2□□□□□ -0.3
EBF1-201ENST00000313708 JAMLQ86YT9 394 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 ZNF444Q8N0Y2 327 aaPredicted RBP13.2□□□□□ -0.3
EBF1-201ENST00000313708 METTL13Q8N6R0 699 aa13.2□□□□□ -0.3
EBF1-201ENST00000313708 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
EBF1-201ENST00000313708 ALG13Q9NP73 1137 aaKnown RBP13.2□□□□□ -0.3
EBF1-201ENST00000313708 WFS1O76024 890 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 FCER1AP12319 257 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 ADORA1P30542 326 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 EIF2B2P49770 351 aaKnown RBP13.19□□□□□ -0.3
EBF1-201ENST00000313708 ASPHQ12797 758 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 TRIP10Q15642 601 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 WDR59Q6PJI9 974 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 PATL1Q86TB9 770 aaKnown RBP13.19□□□□□ -0.3
EBF1-201ENST00000313708 CCDC125Q86Z20 511 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 THAP11Q96EK4 314 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 UBE2OQ9C0C9 1292 aaKnown RBP13.19□□□□□ -0.3
EBF1-201ENST00000313708 ZNF148Q9UQR1 794 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 SSU72P8A0A1W2PR75 194 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 PP2D1A8MPX8 630 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 CCNFP41002 786 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 PDE1BQ01064 536 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 KYNUQ16719 465 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 PI16Q6UXB8 463 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 ISLR2Q6UXK2 745 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 MARK2Q7KZI7 788 aaKnown RBP13.19□□□□□ -0.3
EBF1-201ENST00000313708 TMCO5AQ8N6Q1 288 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 SOS2Q07890 1332 aaPredicted RBP13.19□□□□□ -0.3
EBF1-201ENST00000313708 UNC13BO14795 1591 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 FAM196BA6NMK8 535 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
EBF1-201ENST00000313708 SCG2P13521 617 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 ZNF76P36508 570 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 TNNI2P48788 182 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 TPD52P55327 224 aaPredicted RBP13.19□□□□□ -0.3
EBF1-201ENST00000313708 ATXN2LQ8WWM7 1075 aaKnown RBP13.19□□□□□ -0.3
EBF1-201ENST00000313708 NLRP7Q8WX94 980 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 TRAIPQ9BWF2 469 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 ABCC3O15438 1527 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 ALOX15P16050 662 aaPredicted RBP13.19□□□□□ -0.3
EBF1-201ENST00000313708 PBX1P40424 430 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 ANTXR2P58335 489 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 FKBP3Q00688 224 aaKnown RBP13.19□□□□□ -0.3
EBF1-201ENST00000313708 KIAA2013Q8IYS2 634 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 SPATA17Q96L03 361 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 MAGEB18Q96M61 343 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 BCAP29Q9UHQ4 241 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 NEDD4P46934 1319 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 CALUO43852 315 aaPredicted RBP13.19□□□□□ -0.3
EBF1-201ENST00000313708 YY1P25490 414 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 HOXC9P31274 260 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 TBC1D25Q3MII6 688 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 EPHA10Q5JZY3 1008 aa13.19□□□□□ -0.3
EBF1-201ENST00000313708 TTC17Q96AE7 1141 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms