RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PRELPP51888 382 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 IL9RQ01113 521 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 PLD1Q13393 1074 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 LONRF2Q1L5Z9 754 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 DDX42Q86XP3 938 aaKnown RBP eCLIP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 KCTD6Q8NC69 237 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 GPRC5AQ8NFJ5 357 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 MTBPQ96DY7 904 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SELENOSQ9BQE4 189 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 FAM129AQ9BZQ8 928 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SLC7A5P2Q9GIP4 190 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SENP1Q9P0U3 644 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 KIAA0100Q14667 2235 aaKnown RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 C1orf167Q5SNV9 1468 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SLIT1O75093 1534 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 PVALEFA0A1B0GWK0 134 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 TLDC2A0PJX2 215 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 KRT38O76015 456 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ZRANB2O95218 330 aaKnown RBP eCLIP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 BRAFP15056 766 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ABCB4P21439 1286 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 PHEXP78562 749 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 FRA10AC1Q70Z53 315 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 P2RX5Q93086 422 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CABS1Q96KC9 395 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SPATA16Q9BXB7 569 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ANO3Q9BYT9 981 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 BARHL2Q9NY43 387 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SUN2Q9UH99 717 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 PDS5AQ29RF7 1337 aaKnown RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ANKRD26Q9UPS8 1709 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 LOC102724159A0A0B4J2E5 919 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 H7C4K7 107 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CYP2C8P10632 490 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ZNF18P17022 549 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 FKBP1AP62942 108 aaKnown RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 PDE1BQ01064 536 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CREMQ03060 361 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 PWP2Q15269 919 aaKnown RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 PDCD2Q16342 344 aaPredicted RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ZNF568Q3ZCX4 644 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SBK1Q52WX2 424 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CEP55Q53EZ4 464 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 TSHZ3Q63HK5 1081 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SNRNP48Q6IEG0 339 aaKnown RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CENPUQ71F23 418 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SGMS1Q86VZ5 419 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ZNF677Q86XU0 584 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 DNERQ8NFT8 737 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 PARD3BQ8TEW8 1205 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ZNF526Q8TF50 670 aaPredicted RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ATP6V1E2Q96A05 226 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 PGBD1Q96JS3 809 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SPATA33Q96N06 139 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CNOT10Q9H9A5 744 aaKnown RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 DBNLQ9UJU6 430 aaKnown RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CA12O43570 354 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ORC4O43929 436 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CPP00450 1065 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CLCN1P35523 988 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CTDSPL2Q05D32 466 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 IFRD2Q12894 506 aaPredicted RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ZNF699Q32M78 642 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 MMEL1Q495T6 779 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 C8orf34Q49A92 452 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 UNC13DQ70J99 1090 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CTAGE3PQ8IX95 158 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SCFD1Q8WVM8 642 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 KRT35Q92764 455 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 C1QTNF7Q9BXJ2 289 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ECT2Q9H8V3 914 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 EMILIN3Q9NT22 766 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 GCNT4Q9P109 453 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CNOT7Q9UIV1 285 aaKnown RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 MYH15Q9Y2K3 1946 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SGK1O00141 431 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CXCL11O14625 94 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 RNASEH1O60930 286 aaKnown RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 NPTXRO95502 500 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 EGFRP00533 1210 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CDC25BP30305 580 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 STX2P32856 288 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 ZNF135P52742 658 aaPredicted RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 P3H1Q32P28 736 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 FAM47AQ5JRC9 791 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 NOTUMQ6P988 496 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 KCTD1Q719H9 257 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 RYBPQ8N488 228 aaPredicted RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CAPZA3Q96KX2 299 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 MMTAG2Q9BU76 263 aaKnown RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 MSTO1Q9BUK6 570 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 HTATIP2Q9BUP3 242 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 SUDS3Q9H7L9 328 aaPredicted RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 USTQ9Y2C2 406 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 FRMPD2Q68DX3 1309 aaPredicted RBP3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CLRN2A0PK11 232 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 EFCAB8A8MWE9 144 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 DYRK3O43781 588 aa3.41□□□□□ -1.86
CLOCK-201ENST00000309964 CEP104O60308 925 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms