RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CHAMP1Q96JM3 812 aa19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 PLIN2Q99541 437 aa19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 CELF4Q9BZC1 486 aaKnown RBP19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 INO80BQ9C086 356 aaPredicted RBP19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 XPNPEP1Q9NQW7 623 aa19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 HPSEQ9Y251 543 aa19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 LOXHD1Q8IVV2 1947 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 POLR2DO15514 142 aaKnown RBP19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 MYL1P05976 194 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 PFKFB1P16118 471 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 CYP2C18P33260 490 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 ARL2P36404 184 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 SYKP43405 635 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 FPGSQ05932 587 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 E2F4Q16254 413 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 NAALADL2Q58DX5 795 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 FAM102BQ5T8I3 360 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 PDILTQ8N807 584 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 WNT8BQ93098 351 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 IFT74Q96LB3 600 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 SCLT1Q96NL6 688 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 NFKBIZQ9BYH8 718 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 WNT8AQ9H1J5 351 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 ZMYND8Q9ULU4 1186 aaPredicted RBP19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 CDY2AQ9Y6F7 541 aa19.85■□□□□ 0.77
SSSCA1-201ENST00000309328 WDR81Q562E7 1941 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 VTNP04004 478 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 CTSHP09668 335 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 SLFN14P0C7P3 912 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 ABCD1P33897 745 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 GPC3P51654 580 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 MGAT3Q09327 533 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 MKRN4PQ13434 485 aaPredicted RBP19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 KANK3Q6NY19 840 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 GPBP1Q86WP2 473 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 RHPN2Q8IUC4 686 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 PRPF31Q8WWY3 499 aaKnown RBP19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 NLRP7Q8WX94 980 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 APBB2Q92870 758 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 TMEM143Q96AN5 459 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 DHX58Q96C10 678 aa19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 GCOM2Q9BZD3 368 aaPredicted RBP19.84■□□□□ 0.77
SSSCA1-201ENST00000309328 A0A087WWV3 80 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 A0A1B0GVL5 298 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 EFCAB14O75071 495 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 GPR32O75388 356 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 CHRNA1P02708 482 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 CXCL10P02778 98 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 KRT18P05783 430 aaKnown RBP19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 EIF4BP23588 611 aaKnown RBP19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 PHKA2P46019 1235 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 CCL23P55773 120 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 NLRP11P59045 1033 aaKnown RBP19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 UBE2HP62256 183 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 LAMTOR4Q0VGL1 99 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 MCM6Q14566 821 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 PSRC1Q6PGN9 363 aaPredicted RBP19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 TRAF7Q6Q0C0 670 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 TSHZ1Q6ZSZ6 1077 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 SLC17A8Q8NDX2 589 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 BADQ92934 168 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 ZBTB10Q96DT7 871 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 RUSC1Q9BVN2 902 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 POLR3FQ9H1D9 316 aaPredicted RBP19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 C2orf40Q9H1Z8 148 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 IL23AQ9NPF7 189 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 KBTBD4Q9NVX7 518 aa19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 LARSQ9P2J5 1176 aaKnown RBP19.83■□□□□ 0.77
SSSCA1-201ENST00000309328 A0A087X0B3 334 aa19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 H0YCG3 227 aa19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 TBCAO75347 108 aaKnown RBP19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 ACTN1P12814 892 aa19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 SYN1P17600 705 aa19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 NAMPTP43490 491 aa19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 FAM160A1Q05DH4 1040 aa19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 DMP1Q13316 513 aaPredicted RBP19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 DRP2Q13474 957 aa19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 CNNM4Q6P4Q7 775 aa19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 SRGAP1Q7Z6B7 1085 aa19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 IFNLR1Q8IU57 520 aaPredicted RBP19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 PANK2Q9BZ23 570 aa19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 ADAMTS10Q9H324 1103 aa19.82■□□□□ 0.76
SSSCA1-201ENST00000309328 UMODL1Q5DID0 1318 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 ALPK3Q96L96 1907 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 H0YGN5 161 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 GPR182O15218 404 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 HIP1RO75146 1068 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 SFPQP23246 707 aaKnown RBP eCLIP19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 ITGB8P26012 769 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 NDUFA8P51970 172 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 EFNA5P52803 228 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 SMTNP53814 917 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 KIZQ2M2Z5 673 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 FBXO47Q5MNV8 452 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 ZBTB8OSQ8IWT0 167 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 RNF149Q8NC42 400 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 SEPT8Q92599 483 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 FTHL17Q9BXU8 183 aa19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 MTIF3Q9H2K0 278 aaKnown RBP19.81■□□□□ 0.76
SSSCA1-201ENST00000309328 PARVGQ9HBI0 331 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms