RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 INTS2Q9H0H0 1204 aaKnown RBP19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 NPHP3-ACAD11A0A0J9YXS1 232 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 SPDYE2BA6NHP3 402 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 SPDYE6P0CI01 402 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 ADCY2Q08462 1091 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 ZNF568Q3ZCX4 644 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 NUGGCQ68CJ6 796 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 ATG9AQ7Z3C6 839 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 EXOC4Q96A65 974 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 GABBR1Q9UBS5 961 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 IQANK1A0A1B0GTG1 560 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 PVALEFA0A1B0GWK0 134 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 HMGB1P1B2RPK0 211 aaPredicted RBP19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 MTRQ99707 1265 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 NUP85Q9BW27 656 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 ESYT3A0FGR9 886 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 F5H6K3 240 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 KLRC3Q07444 240 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 PDCLQ13371 301 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 RASIP1Q5U651 963 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 EMBQ6PCB8 327 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 TTC7AQ9ULT0 858 aaPredicted RBP19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 USH1CQ9Y6N9 552 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 CHD1O14646 1710 aa19.91■□□□□ 0.78
UBXN2A-201ENST00000309033 VAMP7P51809 220 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 ARL13BQ3SXY8 428 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 PPP1R18Q6NYC8 613 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 RNF25Q96BH1 459 aaPredicted RBP19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 ELAC2Q9BQ52 826 aaKnown RBP19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 ZNF302Q9NR11 478 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 HEY1Q9Y5J3 304 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 GNGT2O14610 69 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 AKR1B1P15121 316 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 ALX1Q15699 326 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 RHPN2Q8IUC4 686 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 RNF146Q9NTX7 359 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 TTC26A0AVF1 554 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 SPECC1L-ADORA2AF8WAN1 911 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 GGCXP38435 758 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 TTC17Q96AE7 1141 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 RFX7Q2KHR2 1363 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 EPHB1P54762 984 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 MAPK6Q16659 721 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 HP1BP3Q5SSJ5 553 aaPredicted RBP19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 FAM20AQ96MK3 541 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 LXNQ9BS40 222 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 ANKRD65E5RJM6 399 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 DRAP1Q14919 205 aaPredicted RBP19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 SRBD1Q8N5C6 995 aaKnown RBP19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 TBC1D22BQ9NU19 505 aa19.9■□□□□ 0.78
UBXN2A-201ENST00000309033 CCDC188H7C350 402 aa19.89■□□□□ 0.78
UBXN2A-201ENST00000309033 GPC3P51654 580 aa19.89■□□□□ 0.78
UBXN2A-201ENST00000309033 TXLNGQ9NUQ3 528 aa19.89■□□□□ 0.78
UBXN2A-201ENST00000309033 GOLGA8QA0A0J9YX86 632 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 GOLGA8OA6NCC3 632 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 GOLGA8NF8WBI6 632 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 NVLO15381 856 aaKnown RBP19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 MCPH1Q8NEM0 835 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 HPS3Q969F9 1004 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 EPS15L1Q9UBC2 864 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 ABT1Q9ULW3 272 aaKnown RBP19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 LUC7L3O95232 432 aaKnown RBP19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 SOX5P35711 763 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 NAA30Q147X3 362 aaPredicted RBP19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 ZNF564Q8TBZ8 553 aaPredicted RBP19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 QRICH2Q9H0J4 1663 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 SYNGAP1Q96PV0 1343 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 OSBPL9Q96SU4 736 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 HOXC10Q9NYD6 342 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 PODXLO00592 558 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 MMEP08473 750 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 TRIM49P0CI25 452 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 TRIM49CP0CI26 452 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 CYFIP1Q7L576 1253 aa19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 EIF2AK1Q9BQI3 630 aaKnown RBP19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 POLR3FQ9H1D9 316 aaPredicted RBP19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 DIS3Q9Y2L1 958 aaKnown RBP19.89■□□□□ 0.77
UBXN2A-201ENST00000309033 PODNQ7Z5L7 613 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 PCSK1NQ9UHG2 260 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 CDC26Q8NHZ8 85 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 NSUN6Q8TEA1 469 aaKnown RBP19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 HAUS8Q9BT25 410 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 A0A0G2JND7 137 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 GSTA4O15217 222 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 ZRANB2O95218 330 aaKnown RBP eCLIP19.88■□□□□ 0.777e-7■■■■■ 38.3
UBXN2A-201ENST00000309033 PMLP29590 882 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 SPP2Q13103 211 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 MLXIPLQ9NP71 852 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 UBE4BO95155 1302 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 FAM205CA6NFA0 338 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 PI4K2BG5E9Z4 385 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 TMEM35BQ8NCS4 154 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 RCAN1P53805 252 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 SMAD1Q15797 465 aaKnown RBP19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 KLC2Q9H0B6 622 aa19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 MRPL46Q9H2W6 279 aaKnown RBP19.88■□□□□ 0.77
UBXN2A-201ENST00000309033 TRPA1O75762 1119 aa19.87■□□□□ 0.77
UBXN2A-201ENST00000309033 P4HBP07237 508 aaKnown RBP19.87■□□□□ 0.77
UBXN2A-201ENST00000309033 QARSP47897 775 aaKnown RBP19.87■□□□□ 0.77
UBXN2A-201ENST00000309033 FOXD4Q12950 439 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms