RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ETF1P62495 437 aaKnown RBP5.73□□□□□ -1.49
CKS1B-201ENST00000308987 LRRC14Q15048 493 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 ARHGEF6Q15052 776 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 NKG7Q16617 165 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 METTL24Q5JXM2 366 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 NOL9Q5SY16 702 aaKnown RBP5.73□□□□□ -1.49
CKS1B-201ENST00000308987 CAVIN1Q6NZI2 390 aaKnown RBP5.73□□□□□ -1.49
CKS1B-201ENST00000308987 LETMD1Q6P1Q0 360 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 TMC7Q7Z402 723 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 CCDC84Q86UT8 332 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-201ENST00000308987 MFSD2AQ8NA29 543 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 OTUD7AQ8TE49 926 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-201ENST00000308987 SSH3Q8TE77 659 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 ZNF384Q8TF68 577 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 TBC1D22AQ8WUA7 517 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 FAM151AQ8WW52 585 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 DPF3Q92784 378 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 TMX3Q96JJ7 454 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 PDCL3Q9H2J4 239 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 ZKSCAN5Q9Y2L8 839 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 MYH1P12882 1939 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 DDTLA6NHG4 134 aaPredicted RBP5.72□□□□□ -1.49
CKS1B-201ENST00000308987 SMARCA5O60264 1052 aaPredicted RBP5.72□□□□□ -1.49
CKS1B-201ENST00000308987 PSPNO60542 156 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 PRPF40AO75400 957 aaKnown RBP5.72□□□□□ -1.49
CKS1B-201ENST00000308987 PAGE1O75459 146 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 SGPL1O95470 568 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 IGHA2P01877 340 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 NCLP19338 710 aaKnown RBP5.72□□□□□ -1.49
CKS1B-201ENST00000308987 PHKA1P46020 1223 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 FLT3LGP49771 235 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 PLCB3Q01970 1234 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 RRP1BQ14684 758 aaKnown RBP5.72□□□□□ -1.49
CKS1B-201ENST00000308987 KIF22Q14807 665 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 TIGD5Q53EQ6 642 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 HSP90AB4PQ58FF6 505 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 VPS37DQ86XT2 251 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 LILRA2Q8N149 483 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 PDZD8Q8NEN9 1154 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 RAET1EQ8TD07 263 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 GPT2Q8TD30 523 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 DIS3LQ8TF46 1054 aaKnown RBP5.72□□□□□ -1.49
CKS1B-201ENST00000308987 U2AF1L4Q8WU68 220 aaKnown RBP5.72□□□□□ -1.49
CKS1B-201ENST00000308987 ALKBH8Q96BT7 664 aaKnown RBP5.72□□□□□ -1.49
CKS1B-201ENST00000308987 NECAB3Q96P71 396 aaPredicted RBP5.72□□□□□ -1.49
CKS1B-201ENST00000308987 RBCK1Q9BYM8 510 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 DDX4Q9NQI0 724 aaKnown RBP5.72□□□□□ -1.49
CKS1B-201ENST00000308987 HDAC5Q9UQL6 1122 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 SUGT1Q9Y2Z0 365 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 AFG3L2Q9Y4W6 797 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 XIRP2A4UGR9 3374 aa5.72□□□□□ -1.49
CKS1B-201ENST00000308987 MAST2Q6P0Q8 1798 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 EYA2O00167 538 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 CXCL11O14625 94 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 ADCY3O60266 1144 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 WDHD1O75717 1129 aaPredicted RBP5.71□□□□□ -1.5
CKS1B-201ENST00000308987 ADORA1P30542 326 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 HSPA4P34932 840 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 CAP2P40123 477 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 KIR3DL1P43629 444 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 INPP5AQ14642 412 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 PUM3Q15397 648 aaKnown RBP5.71□□□□□ -1.5
CKS1B-201ENST00000308987 ZXDCQ2QGD7 858 aaPredicted RBP5.71□□□□□ -1.5
CKS1B-201ENST00000308987 CAVIN4Q5BKX8 364 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 TREML2Q5T2D2 321 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 DCAF15Q66K64 600 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 ZNF746Q6NUN9 644 aaPredicted RBP5.71□□□□□ -1.5
CKS1B-201ENST00000308987 ZGPATQ8N5A5 531 aaKnown RBP5.71□□□□□ -1.5
CKS1B-201ENST00000308987 FEZF2Q8TBJ5 459 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 DEFB118Q96PH6 123 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 TM6SF1Q9BZW5 370 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 TSPY26PQ9H489 355 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 USP40Q9NVE5 1235 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 TMOD2Q9NZR1 351 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 YBX2Q9Y2T7 364 aaKnown RBP5.71□□□□□ -1.5
CKS1B-201ENST00000308987 ATP6V1DQ9Y5K8 247 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 ZHX2Q9Y6X8 837 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 RLFQ13129 1914 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 LTBP2Q14767 1821 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 GAKO14976 1311 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 TRANK1O15050 2925 aa5.71□□□□□ -1.5
CKS1B-201ENST00000308987 BDP1A6H8Y1 2624 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 DYNC1I1O14576 645 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 ENC1O14682 589 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 ZGLP1P0C6A0 271 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 UBTFL1P0CB47 393 aaPredicted RBP5.7□□□□□ -1.5
CKS1B-201ENST00000308987 CYP7A1P22680 504 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 RHBDL3P58872 404 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 MTX1Q13505 466 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 GADL1Q6ZQY3 521 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 Q7L0L9 218 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 HDXQ7Z353 690 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 SCYL3Q8IZE3 742 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 ZDHHC14Q8IZN3 488 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 OXR1Q8N573 874 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 WDR66Q8TBY9 1149 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 RUFY2Q8WXA3 655 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 LPIN2Q92539 896 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 KIF1BPQ96EK5 621 aa5.7□□□□□ -1.5
CKS1B-201ENST00000308987 PAWRQ96IZ0 340 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms