RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 MTRF1LQ9UGC7 380 aaKnown RBP16.05■□□□□ 0.16
RUNX3-201ENST00000308873 ASIC3Q9UHC3 531 aa16.05■□□□□ 0.16
RUNX3-201ENST00000308873 ABCB11O95342 1321 aa16.05■□□□□ 0.16
RUNX3-201ENST00000308873 DCCP43146 1447 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 FERP16591 822 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 ANKRD20A8PQ5CZ79 823 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 ODR4Q5SWX8 454 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 FAM178BQ8IXR5 827 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 FUKQ8N0W3 1084 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 PLCD4Q9BRC7 762 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 TPX2Q9ULW0 747 aaKnown RBP16.04■□□□□ 0.16
RUNX3-201ENST00000308873 MARCKSL1P49006 195 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 NT5DC3Q86UY8 548 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 ACTRT1Q8TDG2 376 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 FAM118BQ9BPY3 351 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
RUNX3-201ENST00000308873 IGSF9BQ9UPX0 1349 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 GPR75-ASB3A0A0A6YYF3 556 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 ESYT2A0FGR8 921 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 MYO1EQ12965 1108 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 LONRF1Q17RB8 773 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 FAM196AQ6ZSG2 479 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 EP400NLQ6ZTU2 488 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 MREGQ8N565 214 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 L3MBTL1Q9Y468 752 aa16.04■□□□□ 0.16
RUNX3-201ENST00000308873 CASZ1Q86V15 1759 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 SKAP2O75563 359 aaPredicted RBP16.03■□□□□ 0.16
RUNX3-201ENST00000308873 NFIAQ12857 509 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 UBAP2Q5T6F2 1119 aaKnown RBP16.03■□□□□ 0.16
RUNX3-201ENST00000308873 CCDC174Q6PII3 467 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 VEZTQ9HBM0 779 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 ECHS1P30084 290 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 SEPT2Q15019 361 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 LRIG3Q6UXM1 1119 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 CCDC127Q96BQ5 260 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 TRIM37O94972 964 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 EEF2P13639 858 aaKnown RBP16.03■□□□□ 0.16
RUNX3-201ENST00000308873 GCFC2P16383 781 aaKnown RBP16.03■□□□□ 0.16
RUNX3-201ENST00000308873 PSMC2P35998 433 aaKnown RBP16.03■□□□□ 0.16
RUNX3-201ENST00000308873 RHBDL3P58872 404 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 CALCOCO2Q13137 446 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 SEL1L2Q5TEA6 688 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 JAMLQ86YT9 394 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 SLC20A1Q8WUM9 679 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 SLC35C1Q96A29 364 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 ACTR5Q9H9F9 607 aaPredicted RBP16.03■□□□□ 0.16
RUNX3-201ENST00000308873 SLC24A3Q9HC58 644 aa16.03■□□□□ 0.16
RUNX3-201ENST00000308873 METTL14Q9HCE5 456 aaKnown RBP16.03■□□□□ 0.16
RUNX3-201ENST00000308873 CCDC169A6NNP5 214 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 GCLMP48507 274 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 NUGGCQ68CJ6 796 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 FRMD5Q7Z6J6 570 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 CD302Q8IX05 232 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 PPM1KQ8N3J5 372 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 LNX1Q8TBB1 728 aaPredicted RBP16.02■□□□□ 0.16
RUNX3-201ENST00000308873 KRT35Q92764 455 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 SGSM3Q96HU1 749 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 YY1AP1Q9H869 796 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 GOLGA8IPA6NC78 632 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 GOLGA8JA6NMD2 632 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 FTLP02792 175 aaPredicted RBP16.02■□□□□ 0.16
RUNX3-201ENST00000308873 SLC10A5Q5PT55 438 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 C10orf76Q5T2E6 689 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 LRRC57Q8N9N7 239 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 ERP44Q9BS26 406 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 SLC12A6Q9UHW9 1150 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 UBR2Q8IWV8 1755 aa16.02■□□□□ 0.16
RUNX3-201ENST00000308873 NEBLO76041 1014 aa16.02■□□□□ 0.15
RUNX3-201ENST00000308873 SOX5P35711 763 aa16.02■□□□□ 0.15
RUNX3-201ENST00000308873 KIAA1755Q5JYT7 1200 aa16.02■□□□□ 0.15
RUNX3-201ENST00000308873 SWT1Q5T5J6 900 aaKnown RBP16.02■□□□□ 0.15
RUNX3-201ENST00000308873 SLFN12Q8IYM2 578 aa16.02■□□□□ 0.15
RUNX3-201ENST00000308873 C1orf54Q8WWF1 131 aa16.02■□□□□ 0.15
RUNX3-201ENST00000308873 POP1Q99575 1024 aaKnown RBP16.02■□□□□ 0.15
RUNX3-201ENST00000308873 LBHD1Q9BQE6 289 aaPredicted RBP16.02■□□□□ 0.15
RUNX3-201ENST00000308873 SLITRK6Q9H5Y7 841 aa16.02■□□□□ 0.15
RUNX3-201ENST00000308873 TYW1Q9NV66 732 aaKnown RBP16.02■□□□□ 0.15
RUNX3-201ENST00000308873 ALG6Q9Y672 507 aa16.02■□□□□ 0.15
RUNX3-201ENST00000308873 RASGRF2O14827 1237 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 MYL7Q01449 175 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 TNIP1Q15025 636 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 EDRF1Q3B7T1 1238 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 HP1BP3Q5SSJ5 553 aaPredicted RBP16.01■□□□□ 0.15
RUNX3-201ENST00000308873 GPATCH4Q5T3I0 446 aaKnown RBP16.01■□□□□ 0.15
RUNX3-201ENST00000308873 RFFLQ8WZ73 363 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 TAOK3Q9H2K8 898 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 DDX60Q8IY21 1712 aaKnown RBP16.01■□□□□ 0.15
RUNX3-201ENST00000308873 CACNA1SQ13698 1873 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 TISP43B9A030 160 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 FAM86B1E9PN63 330 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 FOXN3O00409 490 aaPredicted RBP16.01■□□□□ 0.15
RUNX3-201ENST00000308873 RPS6KA4O75676 772 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 FAM86B2P0C5J1 330 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 LMNB1P20700 586 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 TM4SF1P30408 202 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 SLC12A3P55017 1021 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 EPHA7Q15375 998 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 CBWD6Q4V339 395 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 CBWD3Q5JTY5 395 aa16.01■□□□□ 0.15
RUNX3-201ENST00000308873 CBWD5Q5RIA9 395 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms