RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 UBA1P22314 1058 aaKnown RBP13.06□□□□□ -0.32
TRIM40-205ENST00000307859 NPEPPSP55786 919 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 ZBED6P86452 979 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 PPP2R3AQ06190 1150 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 KCTD2Q14681 263 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 MEA1Q16626 185 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 CYP26C1Q6V0L0 522 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 SEPT14Q6ZU15 432 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 TOGARAM2Q6ZUX3 1019 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 MORC4Q8TE76 937 aa13.06□□□□□ -0.32
TRIM40-205ENST00000307859 MPHOSPH6Q99547 160 aaKnown RBP13.06□□□□□ -0.32
TRIM40-205ENST00000307859 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRIM40-205ENST00000307859 IGKV6D-21A0A0A0MT36 114 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 GOLGA6L9A6NEM1 432 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 BTBD19C9JJ37 291 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 K7ENM7 598 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 FARP2O94887 1054 aaPredicted RBP13.05□□□□□ -0.32
TRIM40-205ENST00000307859 TUBB4AP04350 444 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 TGFB3P10600 412 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 NCKAP1LP55160 1127 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 PRKCEQ02156 737 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 MYBPC2Q14324 1141 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 MTF1Q14872 753 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 ANKRD23Q86SG2 305 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 GOLGA5Q8TBA6 731 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 TMEM174Q8WUU8 243 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 BRI3BPQ8WY22 251 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 MKNK1Q9BUB5 465 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 EDEM3Q9BZQ6 932 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
TRIM40-205ENST00000307859 AGPAT5Q9NUQ2 364 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 DMAC2Q9NW81 257 aa13.05□□□□□ -0.32
TRIM40-205ENST00000307859 ARMCX3Q9UH62 379 aaPredicted RBP13.05□□□□□ -0.32
TRIM40-205ENST00000307859 MAFBQ9Y5Q3 323 aaPredicted RBP13.05□□□□□ -0.32
TRIM40-205ENST00000307859 KIAA0100Q14667 2235 aaKnown RBP13.05□□□□□ -0.32
TRIM40-205ENST00000307859 CCL15-CCL14A0A0B4J2E2 113 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 H0YGN5 161 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 PDHXO00330 501 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 AKAP3O75969 853 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 CCDC175P0C221 793 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 ZBTB48P10074 688 aaPredicted RBP13.04□□□□□ -0.32
TRIM40-205ENST00000307859 CYP2C8P10632 490 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 EPB41P11171 864 aaKnown RBP13.04□□□□□ -0.32
TRIM40-205ENST00000307859 KCNMA1Q12791 1236 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 NEDD9Q14511 834 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 CCL15Q16663 113 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 XKR3Q5GH77 459 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 CYFIP1Q7L576 1253 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 MAEAQ7L5Y9 396 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 HS2ST1Q7LGA3 356 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 SLC9A9Q8IVB4 645 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 BORCS6Q96GS4 357 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 PCMTD1Q96MG8 357 aaPredicted RBP13.04□□□□□ -0.32
TRIM40-205ENST00000307859 SH2D3AQ9BRG2 576 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 GBP3Q9H0R5 595 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 C17orf75Q9HAS0 396 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 PDLIM7Q9NR12 457 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 AGPAT3Q9NRZ7 376 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 PTPN22Q9Y2R2 807 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 ADGRG1Q9Y653 693 aa13.04□□□□□ -0.32
TRIM40-205ENST00000307859 EPHB6O15197 1021 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 CLIC2O15247 247 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 PGK2P07205 417 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 HNRNPH3P31942 346 aaKnown RBP13.03□□□□□ -0.32
TRIM40-205ENST00000307859 CASP4P49662 377 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 RTP1P59025 263 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 CCNA1P78396 465 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 GTF2BQ00403 316 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 CDK17Q00537 523 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 SP4Q02446 784 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 SPRYD7Q5W111 196 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 KCNV1Q6PIU1 500 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 WDR59Q6PJI9 974 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 KSR1Q8IVT5 923 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 C12orf56Q8IXR9 622 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 MCPH1Q8NEM0 835 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 GPRC5AQ8NFJ5 357 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 SMCR8Q8TEV9 937 aaPredicted RBP13.03□□□□□ -0.32
TRIM40-205ENST00000307859 KIFAP3Q92845 792 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 HVCN1Q96D96 273 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 CEP170P1Q96L14 293 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 DESI2Q9BSY9 194 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 PORCNQ9H237 461 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 IKZF4Q9H2S9 585 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 TMEM206Q9H813 350 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 GPRC5CQ9NQ84 441 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
TRIM40-205ENST00000307859 MORF4L1Q9UBU8 362 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 SEPT9Q9UHD8 586 aaPredicted RBP13.03□□□□□ -0.32
TRIM40-205ENST00000307859 DOCK3Q8IZD9 2030 aa13.03□□□□□ -0.32
TRIM40-205ENST00000307859 GSTTP1A0A1W2PQM5 241 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 SORBS3O60504 671 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 DGAT1O75907 488 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 XRCC5P13010 732 aaKnown RBP13.02□□□□□ -0.32
TRIM40-205ENST00000307859 ATP4AP20648 1035 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 PSMC2P35998 433 aaKnown RBP13.02□□□□□ -0.32
TRIM40-205ENST00000307859 GCLCP48506 637 aaPredicted RBP13.02□□□□□ -0.32
TRIM40-205ENST00000307859 SNRPFP62306 86 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms