RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 MCPH1Q8NEM0 835 aa14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 ANKRD20A12PQ8NF67 263 aa14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 OR6J1Q8NGC5 347 aa14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 TRIM44Q96DX7 344 aaPredicted RBP14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 FAM167AQ96KS9 214 aa14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 CEP170P1Q96L14 293 aa14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 MRPL44Q9H9J2 332 aaKnown RBP14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 CYP26B1Q9NR63 512 aa14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 TBC1D7Q9P0N9 293 aa14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 IMPACTQ9P2X3 320 aa14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 KCNG1Q9UIX4 513 aa14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 TRAF3IP3Q9Y228 551 aa14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 PCDHB13Q9Y5F0 798 aa14.16□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 KCNJ18B7U540 433 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 NOP56O00567 594 aaKnown RBP14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 PDXKO00764 312 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 DYNC1LI2O43237 492 aaPredicted RBP14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 PPP1R37O75864 691 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 INHAP05111 366 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 MMP3P08254 477 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 PLS3P13797 630 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 FKBP3Q00688 224 aaKnown RBP14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 KCNJ12Q14500 433 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 TARBP2Q15633 366 aaKnown RBP14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 NFIL3Q16649 462 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 ODR4Q5SWX8 454 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 PLA2G4FQ68DD2 849 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 TLK2Q86UE8 772 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 FAM178BQ8IXR5 827 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 KIFAP3Q92845 792 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 KCNN1Q92952 543 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 CEP63Q96MT8 703 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 CEP89Q96ST8 783 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 NTPCRQ9BSD7 190 aaKnown RBP14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 UPF3AQ9H1J1 476 aaKnown RBP14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 AZI2Q9H6S1 392 aa14.15□□□□□ -0.14
SHANK2-AS3-201ENST00000307548 TMEM150BA6NC51 233 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 SFI1A8K8P3 1242 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 USO1O60763 962 aaKnown RBP14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 PPFIA4O75335 1185 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 HOXD13P35453 343 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 CASP5P51878 434 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 IRX5P78411 483 aaPredicted RBP14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 KRT31Q15323 416 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 FILIP1LQ4L180 1135 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 FILIP1Q7Z7B0 1213 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 TRIM50Q86XT4 487 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 TMEM174Q8WUU8 243 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 SPIRE2Q8WWL2 714 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 SMARCAD1Q9H4L7 1026 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 DHX33Q9H6R0 707 aaKnown RBP14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 INTS13Q9NVM9 706 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 LGALS2P05162 132 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 PTMAP06454 111 aaKnown RBP14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 MYBP10242 640 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 SCP2P22307 547 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 RFC5P40937 340 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 GJA9P57773 515 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 LRRC55Q6ZSA7 311 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 VSTM4Q8IW00 320 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 DRC7Q8IY82 874 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 EXOC8Q8IYI6 725 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 BBXQ8WY36 941 aaPredicted RBP14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 C16orf70Q9BSU1 422 aa14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 TYW1Q9NV66 732 aaKnown RBP14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 MAGEC2Q9UBF1 373 aaPredicted RBP14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 SEPT9Q9UHD8 586 aaPredicted RBP14.14□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 ADAMTS4O75173 837 aa14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 GCNT3O95395 438 aa14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 GNA14O95837 355 aa14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 NMT1P30419 496 aaKnown RBP14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 COPB1P53618 953 aaKnown RBP14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 HSP90AA4PQ58FG1 418 aa14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 CTU1Q7Z7A3 348 aaKnown RBP14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 ATP8B4Q8TF62 1192 aa14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 AP5M1Q9H0R1 490 aa14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 ATP6V0A4Q9HBG4 840 aa14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 POLD4Q9HCU8 107 aa14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 XPNPEP1Q9NQW7 623 aa14.13□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 CALUO43852 315 aaPredicted RBP14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 PRPF6O94906 941 aaKnown RBP14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 CNGA1P29973 690 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 ABCD1P33897 745 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 PBX1P40424 430 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 NCKAP1LP55160 1127 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 MARSP56192 900 aaKnown RBP14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 SNRPFP62306 86 aaKnown RBP14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 GTF2BQ00403 316 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 MYBPC2Q14324 1141 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 DGKDQ16760 1214 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 NELFCDQ8IXH7 590 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 SPC24Q8NBT2 197 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 SH3TC2Q8TF17 1288 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 HVCN1Q96D96 273 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 CGNQ9P2M7 1197 aaKnown RBP14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 DDX20Q9UHI6 824 aaKnown RBP14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 ARID2Q68CP9 1835 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 MYH11P35749 1972 aa14.12□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 MYADML2A6NDP7 307 aa14.11□□□□□ -0.15
SHANK2-AS3-201ENST00000307548 TGFB1I1O43294 461 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms