RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CFAP47Q6ZTR5 3102 aa13.5□□□□□ -0.25
SMIM4-201ENST00000307106 SPDYE3A6NKU9 549 aa13.5□□□□□ -0.25
SMIM4-201ENST00000307106 IFIT3O14879 490 aaKnown RBP13.5□□□□□ -0.25
SMIM4-201ENST00000307106 DCNP07585 359 aaKnown RBP13.5□□□□□ -0.25
SMIM4-201ENST00000307106 CTSAP10619 480 aa13.5□□□□□ -0.25
SMIM4-201ENST00000307106 ZSCAN20P17040 1043 aaPredicted RBP13.5□□□□□ -0.25
SMIM4-201ENST00000307106 SDHBP21912 280 aa13.5□□□□□ -0.25
SMIM4-201ENST00000307106 LETM2Q2VYF4 491 aa13.5□□□□□ -0.25
SMIM4-201ENST00000307106 C1orf210Q8IVY1 113 aa13.5□□□□□ -0.25
SMIM4-201ENST00000307106 RSAD2Q8WXG1 361 aa13.5□□□□□ -0.25
SMIM4-201ENST00000307106 PSTPIP2Q9H939 334 aa13.5□□□□□ -0.25
SMIM4-201ENST00000307106 KCNH7Q9NS40 1196 aa13.5□□□□□ -0.25
SMIM4-201ENST00000307106 DIAPH3Q9NSV4 1193 aa13.5□□□□□ -0.25
SMIM4-201ENST00000307106 SEC63Q9UGP8 760 aaKnown RBP13.5□□□□□ -0.25
SMIM4-201ENST00000307106 TDRD15B5MCY1 1934 aaKnown RBP13.5□□□□□ -0.25
SMIM4-201ENST00000307106 KINO60870 393 aaKnown RBP13.49□□□□□ -0.25
SMIM4-201ENST00000307106 GPR32O75388 356 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 ATG7O95352 703 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 VTNP04004 478 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 ATXN1P54253 815 aaKnown RBP13.49□□□□□ -0.25
SMIM4-201ENST00000307106 TRDNQ13061 729 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 WTAPQ15007 396 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMIM4-201ENST00000307106 UBE2SQ16763 222 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 KIAA0319Q5VV43 1072 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 CATIPQ7Z7H3 387 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 PPFIBP1Q86W92 1011 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 TMEM173Q86WV6 379 aaPredicted RBP13.49□□□□□ -0.25
SMIM4-201ENST00000307106 HELQQ8TDG4 1101 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 SPZ1Q9BXG8 430 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 MRPL9Q9BYD2 267 aaKnown RBP13.49□□□□□ -0.25
SMIM4-201ENST00000307106 DLGAP2Q9P1A6 1054 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 NCDNQ9UBB6 729 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 PCDHA6Q9UN73 950 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 SIT1Q9Y3P8 196 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 PCDHA8Q9Y5H6 950 aa13.49□□□□□ -0.25
SMIM4-201ENST00000307106 IGKV6D-21A0A0A0MT36 114 aa13.48□□□□□ -0.25
SMIM4-201ENST00000307106 BACH1O14867 736 aa13.48□□□□□ -0.25
SMIM4-201ENST00000307106 SRFP11831 508 aa13.48□□□□□ -0.25
SMIM4-201ENST00000307106 POLGP54098 1239 aaPredicted RBP13.48□□□□□ -0.25
SMIM4-201ENST00000307106 ZNF484Q5JVG2 852 aa13.48□□□□□ -0.25
SMIM4-201ENST00000307106 FAM160B1Q5W0V3 765 aa13.48□□□□□ -0.25
SMIM4-201ENST00000307106 C15orf39Q6ZRI6 1047 aa13.48□□□□□ -0.25
SMIM4-201ENST00000307106 DDX53Q86TM3 631 aaKnown RBP13.48□□□□□ -0.25
SMIM4-201ENST00000307106 METTL13Q8N6R0 699 aa13.48□□□□□ -0.25
SMIM4-201ENST00000307106 MXRA8Q9BRK3 442 aa13.48□□□□□ -0.25
SMIM4-201ENST00000307106 GPR179Q6PRD1 2367 aa13.47□□□□□ -0.25
SMIM4-201ENST00000307106 BAHCC1Q9P281 2608 aa13.47□□□□□ -0.25
SMIM4-201ENST00000307106 POTEMA6NI47 508 aa13.47□□□□□ -0.25
SMIM4-201ENST00000307106 ZBTB42B2RXF5 422 aa13.47□□□□□ -0.25
SMIM4-201ENST00000307106 N4BP1O75113 896 aaKnown RBP13.47□□□□□ -0.25
SMIM4-201ENST00000307106 ZC3H11AO75152 810 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMIM4-201ENST00000307106 C22orf31O95567 290 aa13.47□□□□□ -0.25
SMIM4-201ENST00000307106 GBP2P32456 591 aaPredicted RBP13.47□□□□□ -0.25
SMIM4-201ENST00000307106 ITGB3BPQ13352 177 aaPredicted RBP13.47□□□□□ -0.25
SMIM4-201ENST00000307106 VARS2Q5ST30 1063 aaKnown RBP13.47□□□□□ -0.25
SMIM4-201ENST00000307106 PHLDB3Q6NSJ2 640 aa13.47□□□□□ -0.25
SMIM4-201ENST00000307106 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
SMIM4-201ENST00000307106 ZNF598Q86UK7 904 aaKnown RBP13.47□□□□□ -0.25
SMIM4-201ENST00000307106 SLC44A3Q8N4M1 653 aa13.47□□□□□ -0.25
SMIM4-201ENST00000307106 GPR161Q8N6U8 529 aaKnown RBP13.47□□□□□ -0.25
SMIM4-201ENST00000307106 CTCFLQ8NI51 663 aaPredicted RBP13.47□□□□□ -0.25
SMIM4-201ENST00000307106 GPR152Q8TDT2 470 aa13.47□□□□□ -0.25
SMIM4-201ENST00000307106 IGSF21Q96ID5 467 aa13.47□□□□□ -0.25
SMIM4-201ENST00000307106 CDV3Q9UKY7 258 aaKnown RBP13.47□□□□□ -0.25
SMIM4-201ENST00000307106 COL4A3Q01955 1670 aa13.47□□□□□ -0.25
SMIM4-201ENST00000307106 A0A0U1RQF3 1178 aa13.46□□□□□ -0.25
SMIM4-201ENST00000307106 DDX39AO00148 427 aaKnown RBP13.46□□□□□ -0.25
SMIM4-201ENST00000307106 CCNE2O96020 404 aa13.46□□□□□ -0.25
SMIM4-201ENST00000307106 SMARCA1P28370 1054 aa13.46□□□□□ -0.25
SMIM4-201ENST00000307106 CLCN4P51793 760 aa13.46□□□□□ -0.25
SMIM4-201ENST00000307106 NLRP11P59045 1033 aaKnown RBP13.46□□□□□ -0.25
SMIM4-201ENST00000307106 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.25
SMIM4-201ENST00000307106 PTPN14Q15678 1187 aa13.46□□□□□ -0.25
SMIM4-201ENST00000307106 PDXDC2PQ6P474 469 aa13.46□□□□□ -0.25
SMIM4-201ENST00000307106 CCDC60Q8IWA6 550 aaPredicted RBP13.46□□□□□ -0.25
SMIM4-201ENST00000307106 KLHL5Q96PQ7 755 aa13.46□□□□□ -0.25
SMIM4-201ENST00000307106 EMILIN2Q9BXX0 1053 aa13.46□□□□□ -0.25
SMIM4-201ENST00000307106 LNPKQ9C0E8 428 aa13.46□□□□□ -0.25
SMIM4-201ENST00000307106 AGO4Q9HCK5 861 aaKnown RBP13.46□□□□□ -0.25
SMIM4-201ENST00000307106 ZNF302Q9NR11 478 aa13.46□□□□□ -0.25
SMIM4-201ENST00000307106 ARHGEF3Q9NR81 526 aa13.46□□□□□ -0.25
SMIM4-201ENST00000307106 USP24Q9UPU5 2620 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 CARNS1A5YM72 827 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 HIP1O00291 1037 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 GLULP15104 373 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 ATP4AP20648 1035 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 EIF4BP23588 611 aaKnown RBP13.45□□□□□ -0.26
SMIM4-201ENST00000307106 KLRC2P26717 231 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 KIF5BP33176 963 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 ABHD15Q6UXT9 468 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 CKAP2LQ8IYA6 745 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 MAML2Q8IZL2 1156 aaPredicted RBP13.45□□□□□ -0.26
SMIM4-201ENST00000307106 PJA1Q8NG27 643 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 BCL7CQ8WUZ0 217 aaPredicted RBP13.45□□□□□ -0.26
SMIM4-201ENST00000307106 STAMQ92783 540 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 NXPE3Q969Y0 559 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 MAP3K14Q99558 947 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 MYL10Q9BUA6 226 aa13.45□□□□□ -0.26
SMIM4-201ENST00000307106 EPS15L1Q9UBC2 864 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms