RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 SPIRE2Q8WWL2 714 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 IFT74Q96LB3 600 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 VPS16Q9H269 839 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 TMEM206Q9H813 350 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 XPNPEP1Q9NQW7 623 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 CETN3O15182 167 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 PPP1R37O75864 691 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 MARK3P27448 753 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 CYP2C19P33261 490 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 MTIF2P46199 727 aaKnown RBP19.3■□□□□ 0.68
KRT28-201ENST00000306658 NCKAP1LP55160 1127 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 PLCB4Q15147 1175 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 PRAMEF19Q5SWL8 479 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 HS2ST1Q7LGA3 356 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 CCDC186Q7Z3E2 898 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 HAUS6Q7Z4H7 955 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 OR6J1Q8NGC5 347 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 GOLGA5Q8TBA6 731 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 CEP89Q96ST8 783 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 NTPCRQ9BSD7 190 aaKnown RBP19.3■□□□□ 0.68
KRT28-201ENST00000306658 TUBGCP2Q9BSJ2 902 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 CFHR5Q9BXR6 569 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 INTS13Q9NVM9 706 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 TAB2Q9NYJ8 693 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 NRBP1Q9UHY1 535 aa19.3■□□□□ 0.68
KRT28-201ENST00000306658 CCDC169A6NNP5 214 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 HBP1O60381 514 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 TBC1D8O95759 1140 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 LGALS2P05162 132 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 ZNF865P0CJ78 1059 aaPredicted RBP19.29■□□□□ 0.68
KRT28-201ENST00000306658 ABCD1P33897 745 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 NPTX2P47972 431 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 GSDMDP57764 484 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 GTF2BQ00403 316 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 SP3Q02447 781 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 KCNA1Q09470 495 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 ZC3H3Q8IXZ2 948 aaKnown RBP19.29■□□□□ 0.68
KRT28-201ENST00000306658 SYCP3Q8IZU3 236 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 ACCSQ96QU6 501 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 GBP3Q9H0R5 595 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 KMT5AQ9NQR1 393 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 TRPC6Q9Y210 931 aa19.29■□□□□ 0.68
KRT28-201ENST00000306658 H0YCG3 227 aa19.28■□□□□ 0.68
KRT28-201ENST00000306658 SLC16A4O15374 487 aa19.28■□□□□ 0.68
KRT28-201ENST00000306658 MAFO75444 373 aaPredicted RBP19.28■□□□□ 0.68
KRT28-201ENST00000306658 IGHA2P01877 340 aa19.28■□□□□ 0.68
KRT28-201ENST00000306658 PRKCSHP14314 528 aaPredicted RBP19.28■□□□□ 0.68
KRT28-201ENST00000306658 PTGS1P23219 599 aa19.28■□□□□ 0.68
KRT28-201ENST00000306658 NR2F2P24468 414 aa19.28■□□□□ 0.68
KRT28-201ENST00000306658 TBC1D8BQ0IIM8 1120 aa19.28■□□□□ 0.68
KRT28-201ENST00000306658 HVCN1Q96D96 273 aa19.28■□□□□ 0.68
KRT28-201ENST00000306658 JPH2Q9BR39 696 aaPredicted RBP19.28■□□□□ 0.68
KRT28-201ENST00000306658 POLR3FQ9H1D9 316 aaPredicted RBP19.28■□□□□ 0.68
KRT28-201ENST00000306658 ZNF215Q9UL58 517 aaPredicted RBP19.28■□□□□ 0.68
KRT28-201ENST00000306658 TEX33O43247 280 aa19.27■□□□□ 0.68
KRT28-201ENST00000306658 GAS2O43903 313 aaKnown RBP19.27■□□□□ 0.68
KRT28-201ENST00000306658 SCP2P22307 547 aa19.27■□□□□ 0.68
KRT28-201ENST00000306658 SOX10P56693 466 aa19.27■□□□□ 0.68
KRT28-201ENST00000306658 PPP2R5AQ15172 486 aa19.27■□□□□ 0.68
KRT28-201ENST00000306658 NFIL3Q16649 462 aa19.27■□□□□ 0.68
KRT28-201ENST00000306658 DGKDQ16760 1214 aa19.27■□□□□ 0.68
KRT28-201ENST00000306658 SPECC1LQ69YQ0 1117 aa19.27■□□□□ 0.68
KRT28-201ENST00000306658 NOC4LQ9BVI4 516 aaKnown RBP19.27■□□□□ 0.68
KRT28-201ENST00000306658 ARHGAP39Q9C0H5 1083 aa19.27■□□□□ 0.68
KRT28-201ENST00000306658 CGNQ9P2M7 1197 aaKnown RBP19.27■□□□□ 0.68
KRT28-201ENST00000306658 FAM184BQ9ULE4 1060 aa19.27■□□□□ 0.68
KRT28-201ENST00000306658 LGALS16A8MUM7 142 aa19.27■□□□□ 0.67
KRT28-201ENST00000306658 PES1O00541 588 aaKnown RBP19.27■□□□□ 0.67
KRT28-201ENST00000306658 TGFB1I1O43294 461 aa19.27■□□□□ 0.67
KRT28-201ENST00000306658 NR3C1P04150 777 aa19.27■□□□□ 0.67
KRT28-201ENST00000306658 HOXD8P13378 290 aaPredicted RBP19.27■□□□□ 0.67
KRT28-201ENST00000306658 CCDC40Q4G0X9 1142 aa19.27■□□□□ 0.67
KRT28-201ENST00000306658 MFSD14CQ5VZR4 134 aa19.27■□□□□ 0.67
KRT28-201ENST00000306658 KSR1Q8IVT5 923 aa19.27■□□□□ 0.67
KRT28-201ENST00000306658 TMEM161BQ8NDZ6 487 aa19.27■□□□□ 0.67
KRT28-201ENST00000306658 TCP11Q8WWU5 503 aa19.27■□□□□ 0.67
KRT28-201ENST00000306658 TMEM143Q96AN5 459 aa19.27■□□□□ 0.67
KRT28-201ENST00000306658 EXOC7Q9UPT5 735 aa19.27■□□□□ 0.67
KRT28-201ENST00000306658 GNEQ9Y223 722 aaKnown RBP19.27■□□□□ 0.67
KRT28-201ENST00000306658 Q9Y3F1 56 aa19.27■□□□□ 0.67
KRT28-201ENST00000306658 ZMYM2Q9UBW7 1377 aa19.26■□□□□ 0.67
KRT28-201ENST00000306658 DYNC1LI2O43237 492 aaPredicted RBP19.26■□□□□ 0.67
KRT28-201ENST00000306658 TRPA1O75762 1119 aa19.26■□□□□ 0.67
KRT28-201ENST00000306658 MMP3P08254 477 aa19.26■□□□□ 0.67
KRT28-201ENST00000306658 ARL2P36404 184 aa19.26■□□□□ 0.67
KRT28-201ENST00000306658 VEGFBP49765 207 aa19.26■□□□□ 0.67
KRT28-201ENST00000306658 FLT3LGP49771 235 aa19.26■□□□□ 0.67
KRT28-201ENST00000306658 DNM2P50570 870 aa19.26■□□□□ 0.67
KRT28-201ENST00000306658 MARSP56192 900 aaKnown RBP19.26■□□□□ 0.67
KRT28-201ENST00000306658 SNRPFP62306 86 aaKnown RBP19.26■□□□□ 0.67
KRT28-201ENST00000306658 UBXN1Q04323 297 aa19.26■□□□□ 0.67
KRT28-201ENST00000306658 ZNF484Q5JVG2 852 aa19.26■□□□□ 0.67
KRT28-201ENST00000306658 BSNDQ8WZ55 320 aa19.26■□□□□ 0.67
KRT28-201ENST00000306658 RNF186Q9NXI6 227 aa19.26■□□□□ 0.67
KRT28-201ENST00000306658 A6NJR5 290 aa19.25■□□□□ 0.67
KRT28-201ENST00000306658 H3BRB1 525 aa19.25■□□□□ 0.67
KRT28-201ENST00000306658 ADCY6O43306 1168 aa19.25■□□□□ 0.67
KRT28-201ENST00000306658 MAN2A1Q16706 1144 aa19.25■□□□□ 0.67
KRT28-201ENST00000306658 BRDTQ58F21 947 aaPredicted RBP19.25■□□□□ 0.67
KRT28-201ENST00000306658 IER5Q5VY09 327 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms