RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 EXOC3L1Q86VI1 746 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 SLC35G2Q8TBE7 412 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 FBF1Q8TES7 1133 aa20.4■□□□□ 0.86
CHRNB1-201ENST00000306071 DDX3XO00571 662 aaKnown RBP eCLIP20.39■□□□□ 0.852e-8■■■■■ 58.7
CHRNB1-201ENST00000306071 DDX3YO15523 660 aaKnown RBP20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 GJB6O95452 261 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 TDP2O95551 362 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 NR2F2P24468 414 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 PCK1P35558 622 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 PAPOLAP51003 745 aaKnown RBP20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 TMEM119Q4V9L6 283 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 ANKRD42Q8N9B4 389 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 C18orf8Q96DM3 657 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 ANKRD27Q96NW4 1050 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 RAB3IPQ96QF0 476 aaPredicted RBP20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 ZHX3Q9H4I2 956 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 ETNK1Q9HBU6 452 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 EMILIN3Q9NT22 766 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 SEC63Q9UGP8 760 aaKnown RBP20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 DIS3Q9Y2L1 958 aaKnown RBP20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 TMEM120BA0PK00 339 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 RIPK2O43353 540 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 RAB27AP51159 221 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 DRG2P55039 364 aaKnown RBP20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 MXRA7P84157 204 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 ORC2Q13416 577 aaPredicted RBP20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 PDIA5Q14554 519 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 ECM1Q16610 540 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 CCDC65Q8IXS2 484 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 GDAP1Q8TB36 358 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 LZTS2Q9BRK4 669 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 TMEM109Q9BVC6 243 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 KCNK9Q9NPC2 374 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 PAPOLBQ9NRJ5 636 aaKnown RBP20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 GRHL1Q9NZI5 618 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 INTUQ9ULD6 942 aa20.39■□□□□ 0.85
CHRNB1-201ENST00000306071 ZNF142P52746 1687 aaPredicted RBP20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 LRRD1A4D1F6 860 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 AFPP02771 609 aaKnown RBP20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 RPL21P46778 160 aaKnown RBP20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 PLS1Q14651 629 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 CCDC25Q86WR0 208 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 SLC17A8Q8NDX2 589 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 SCFD1Q8WVM8 642 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 CARD9Q9H257 536 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 NKX1-2Q9UD57 310 aaPredicted RBP20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 ARMCX3Q9UH62 379 aaPredicted RBP20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 RTCBQ9Y3I0 505 aaKnown RBP20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 ATAD5Q96QE3 1844 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 GNAT1P11488 350 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 FERP16591 822 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 ABCB4P21439 1286 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 DCAF17Q5H9S7 520 aaPredicted RBP20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 LMNTD2Q8IXW0 634 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 RMDN2Q96LZ7 410 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 TMEM47Q9BQJ4 181 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 KCTD10Q9H3F6 313 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 NENFQ9UMX5 172 aa20.38■□□□□ 0.85
CHRNB1-201ENST00000306071 LAMB1P07942 1786 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 NPHP3-ACAD11A0A0J9YXS1 232 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 WFS1O76024 890 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 PDHA1P08559 390 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 MYBL1P10243 752 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 ANXA13P27216 316 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 LONRF1Q17RB8 773 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 TCERG1LQ5VWI1 586 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 DPY19L2P1Q6NXN4 242 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 PRDM11Q9NQV5 511 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 KLHL14Q9P2G3 628 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 PARP2Q9UGN5 583 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 GFPT2O94808 682 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 PLCG2P16885 1265 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 DIXDC1Q155Q3 683 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 ANO7Q6IWH7 933 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 ARHGEF2Q92974 986 aaKnown RBP20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 NHSL1Q5SYE7 1610 aa20.37■□□□□ 0.85
CHRNB1-201ENST00000306071 MARCH6O60337 910 aa20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 TRAF1Q13077 416 aa20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 TNFAIP8L3Q5GJ75 292 aa20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 GJB7Q6PEY0 223 aa20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 RFFLQ8WZ73 363 aa20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 SPZ1Q9BXG8 430 aa20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 AJAP1Q9UKB5 411 aaPredicted RBP20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 CCNB1P14635 433 aa20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 CREB1P16220 341 aa20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 RAD23BP54727 409 aa20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 CTNNBL1Q8WYA6 563 aaPredicted RBP20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 TMOD4Q9NZQ9 345 aa20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 ZMYND8Q9ULU4 1186 aaPredicted RBP20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 SLIT2O94813 1529 aa20.36■□□□□ 0.85
CHRNB1-201ENST00000306071 XRCC5P13010 732 aaKnown RBP20.35■□□□□ 0.85
CHRNB1-201ENST00000306071 RPS6KA3P51812 740 aa20.35■□□□□ 0.85
CHRNB1-201ENST00000306071 CWF19L1Q69YN2 538 aaKnown RBP20.35■□□□□ 0.85
CHRNB1-201ENST00000306071 MFSD5Q6N075 450 aa20.35■□□□□ 0.85
CHRNB1-201ENST00000306071 GLYCTKQ8IVS8 523 aa20.35■□□□□ 0.85
CHRNB1-201ENST00000306071 ZNF444Q8N0Y2 327 aaPredicted RBP20.35■□□□□ 0.85
CHRNB1-201ENST00000306071 LRRC42Q9Y546 428 aa20.35■□□□□ 0.85
CHRNB1-201ENST00000306071 ATP8B3O60423 1300 aa20.35■□□□□ 0.85
CHRNB1-201ENST00000306071 UNC5CO95185 931 aa20.35■□□□□ 0.85
CHRNB1-201ENST00000306071 KRT18P05783 430 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms