RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PCDHB4Q9Y5E5 795 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 ZSCAN5CA6NGD5 496 aaPredicted RBP14.3□□□□□ -0.12
DDX54-201ENST00000306014 FGFR4P22455 802 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 PACSIN1Q9BY11 444 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 INTS2Q9H0H0 1204 aaKnown RBP14.3□□□□□ -0.12
DDX54-201ENST00000306014 VCXQ9H320 206 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 PNMA2Q9UL42 364 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 LRRIQ4A6NIV6 560 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 PDXKO00764 312 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 PEX3P56589 373 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 GPSM2P81274 684 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 ITIH3Q06033 890 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 CENPPQ6IPU0 288 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 CCDC110Q8TBZ0 833 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 MTMR8Q96EF0 704 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 REEP2Q9BRK0 252 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 KMT5AQ9NQR1 393 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 CNOT8Q9UFF9 292 aaKnown RBP14.3□□□□□ -0.12
DDX54-201ENST00000306014 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.3□□□□□ -0.12
DDX54-201ENST00000306014 WDR91A4D1P6 747 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 GLI1P08151 1106 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 CA4P22748 312 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 BPIFB4P59827 614 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 EN1Q05925 392 aaPredicted RBP14.29□□□□□ -0.12
DDX54-201ENST00000306014 ZNF543Q08ER8 600 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 PTGISQ16647 500 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 CASC4Q6P4E1 433 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 SLC35G2Q8TBE7 412 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 CYFIP2Q96F07 1278 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 DUSP9Q99956 384 aaKnown RBP14.29□□□□□ -0.12
DDX54-201ENST00000306014 HAUS2Q9NVX0 235 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 EVI5O60447 810 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 PRLRP16471 622 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 HNRNPH1P31943 449 aaKnown RBP14.29□□□□□ -0.12
DDX54-201ENST00000306014 USP11P51784 963 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 MKRN4PQ13434 485 aaPredicted RBP14.29□□□□□ -0.12
DDX54-201ENST00000306014 LGSNQ5TDP6 509 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 PITPNM3Q9BZ71 974 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 F5H6K3 240 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 MYBP10242 640 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 CHRNA3P32297 505 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■■■□ 24.9
DDX54-201ENST00000306014 KLRC3Q07444 240 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 RNF207Q6ZRF8 634 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 NIM1KQ8IY84 436 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 DAGLBQ8NCG7 672 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.29□□□□□ -0.128e-7■■■■■ 50.8
DDX54-201ENST00000306014 EIF2AK1Q9BQI3 630 aaKnown RBP14.29□□□□□ -0.12
DDX54-201ENST00000306014 COA1Q9GZY4 146 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 ISCUQ9H1K1 167 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 EHD4Q9H223 541 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 PALM3A6NDB9 673 aaPredicted RBP14.29□□□□□ -0.12
DDX54-201ENST00000306014 PDE2AO00408 941 aaPredicted RBP14.29□□□□□ -0.12
DDX54-201ENST00000306014 FAM107AO95990 144 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 HSD17B3P37058 310 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 CDK17Q00537 523 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 NBPF9Q3BBW0 867 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 SCYL3Q8IZE3 742 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 KIAA0895Q8NCT3 520 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 HSD3B7Q9H2F3 369 aa14.29□□□□□ -0.12
DDX54-201ENST00000306014 CPSF2Q9P2I0 782 aaKnown RBP14.29□□□□□ -0.12
DDX54-201ENST00000306014 FAM187AA6NFU0 413 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 RNF225M0QZC1 329 aaPredicted RBP14.28□□□□□ -0.12
DDX54-201ENST00000306014 DYNLT1P63172 113 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 TMEM179Q6ZVK1 233 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
DDX54-201ENST00000306014 COL5A2P05997 1499 aaPredicted RBP14.28□□□□□ -0.12
DDX54-201ENST00000306014 WNT7AO00755 349 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 BRAFP15056 766 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 COPB2P35606 906 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 SARNPP82979 210 aaKnown RBP14.28□□□□□ -0.12
DDX54-201ENST00000306014 LMNB2Q03252 620 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 MYO1EQ12965 1108 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 NFIXQ14938 502 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 GJB7Q6PEY0 223 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 DNAAF5Q86Y56 855 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 METTL13Q8N6R0 699 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 XXYLT1Q8NBI6 393 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 DCAF4Q8WV16 495 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 MPHOSPH6Q99547 160 aaKnown RBP14.28□□□□□ -0.12
DDX54-201ENST00000306014 BYSLQ13895 437 aaKnown RBP14.28□□□□□ -0.12
DDX54-201ENST00000306014 EDRF1Q3B7T1 1238 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 KIAA1755Q5JYT7 1200 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 RC3H1Q5TC82 1133 aaKnown RBP14.28□□□□□ -0.12
DDX54-201ENST00000306014 BSPRYQ5W0U4 402 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 C16orf86Q6ZW13 317 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 ZNF564Q8TBZ8 553 aaPredicted RBP14.28□□□□□ -0.12
DDX54-201ENST00000306014 CEP170P1Q96L14 293 aa14.28□□□□□ -0.12
DDX54-201ENST00000306014 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.28□□□□□ -0.12
DDX54-201ENST00000306014 FOXP2O15409 715 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 PADI6Q6TGC4 694 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 LRIG3Q6UXM1 1119 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 MCF2L2Q86YR7 1114 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 C1orf54Q8WWF1 131 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 SEC16BQ96JE7 1060 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 NUP85Q9BW27 656 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 MON2Q7Z3U7 1717 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 RASA4BC9J798 803 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 RASA4O43374 803 aa14.27□□□□□ -0.12
DDX54-201ENST00000306014 BAG2O95816 211 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms