RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 WNT7AO00755 349 aa29.59■■■□□ 2.33
CDKN2A-201ENST00000304494 RB1P06400 928 aa29.59■■■□□ 2.33
CDKN2A-201ENST00000304494 DARSP14868 501 aaKnown RBP29.59■■■□□ 2.33
CDKN2A-201ENST00000304494 YWHABP31946 246 aaKnown RBP29.59■■■□□ 2.33
CDKN2A-201ENST00000304494 CTNNB1P35222 781 aa29.59■■■□□ 2.33
CDKN2A-201ENST00000304494 RFC5P40937 340 aa29.59■■■□□ 2.33
CDKN2A-201ENST00000304494 TXKP42681 527 aa29.59■■■□□ 2.33
CDKN2A-201ENST00000304494 ORC2Q13416 577 aaPredicted RBP29.59■■■□□ 2.33
CDKN2A-201ENST00000304494 DRP2Q13474 957 aa29.59■■■□□ 2.33
CDKN2A-201ENST00000304494 GCOM2Q9BZD3 368 aaPredicted RBP29.59■■■□□ 2.33
CDKN2A-201ENST00000304494 SUCLA2Q9P2R7 463 aaPredicted RBP29.59■■■□□ 2.33
CDKN2A-201ENST00000304494 C9IYK1 514 aa29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 C5orf67F2Z3F1 127 aa29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 REV3LO60673 3130 aa29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 ZSCAN20P17040 1043 aaPredicted RBP29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 ATP2B1P20020 1258 aa29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 MCM7P33993 719 aa29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 POLGP54098 1239 aaPredicted RBP29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 NPEPPSP55786 919 aa29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 CYP4A11Q02928 519 aa29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 GPM6BQ13491 265 aa29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 CTTNQ14247 550 aaKnown RBP29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 RALGAPA2Q2PPJ7 1873 aa29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 ZNF410Q86VK4 478 aa29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 ZNF668Q96K58 619 aaPredicted RBP29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 EIF2AK1Q9BQI3 630 aaKnown RBP29.58■■■□□ 2.33
CDKN2A-201ENST00000304494 SLITRK3O94933 977 aa29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 BMPR1AP36894 532 aa29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 MCM2P49736 904 aa29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 MRPS5P82675 430 aaKnown RBP29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 DSC3Q14574 896 aa29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 TJAP1Q5JTD0 557 aa29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 NOSTRINQ8IVI9 506 aa29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 TPH2Q8IWU9 490 aa29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 SYMPKQ92797 1274 aaKnown RBP29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 MRPL38Q96DV4 380 aaKnown RBP29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 TBC1D32Q96NH3 1257 aa29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 C11orf84Q9BUA3 381 aaPredicted RBP29.57■■■□□ 2.32
CDKN2A-201ENST00000304494 GAS2O43903 313 aaKnown RBP29.56■■■□□ 2.32
CDKN2A-201ENST00000304494 IBSPP21815 317 aaPredicted RBP29.56■■■□□ 2.32
CDKN2A-201ENST00000304494 RHPN2Q8IUC4 686 aa29.56■■■□□ 2.32
CDKN2A-201ENST00000304494 HSD17B14Q9BPX1 270 aa29.56■■■□□ 2.32
CDKN2A-201ENST00000304494 COL25A1Q9BXS0 654 aaPredicted RBP29.56■■■□□ 2.32
CDKN2A-201ENST00000304494 INO80BQ9C086 356 aaPredicted RBP29.56■■■□□ 2.32
CDKN2A-201ENST00000304494 DHX33Q9H6R0 707 aaKnown RBP29.56■■■□□ 2.32
CDKN2A-201ENST00000304494 ELAC1Q9H777 363 aaKnown RBP29.56■■■□□ 2.32
CDKN2A-201ENST00000304494 COG5Q9UP83 839 aa29.56■■■□□ 2.32
CDKN2A-201ENST00000304494 NLRC5Q86WI3 1866 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 PRRC2BQ5JSZ5 2229 aaKnown RBP29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 LINC00271P0C7V0 271 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 TRAPPC10P48553 1259 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 FAM189BP81408 668 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 AAK1Q2M2I8 961 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 TMX3Q96JJ7 454 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 ASB2Q96Q27 587 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 PLVAPQ9BX97 442 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 TMEM60Q9H2L4 133 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 TMEM161AQ9NX61 479 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 NOL7Q9UMY1 257 aaKnown RBP29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 MRPL42Q9Y6G3 142 aaKnown RBP29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 VCANP13611 3396 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 XIRP2A4UGR9 3374 aa29.55■■■□□ 2.32
CDKN2A-201ENST00000304494 A0A087WZ62 844 aa29.54■■■□□ 2.32
CDKN2A-201ENST00000304494 LYPLA2O95372 231 aa29.54■■■□□ 2.32
CDKN2A-201ENST00000304494 SFPQP23246 707 aaKnown RBP eCLIP29.54■■■□□ 2.32
CDKN2A-201ENST00000304494 PAN2Q504Q3 1202 aaKnown RBP29.54■■■□□ 2.32
CDKN2A-201ENST00000304494 XKR9Q5GH70 373 aa29.54■■■□□ 2.32
CDKN2A-201ENST00000304494 ZNF579Q8NAF0 562 aaKnown RBP29.54■■■□□ 2.32
CDKN2A-201ENST00000304494 FDXACB1Q9BRP7 624 aaPredicted RBP29.54■■■□□ 2.32
CDKN2A-201ENST00000304494 ATP6V0A4Q9HBG4 840 aa29.54■■■□□ 2.32
CDKN2A-201ENST00000304494 SPTBN5Q9NRC6 3674 aaKnown RBP29.54■■■□□ 2.32
CDKN2A-201ENST00000304494 TTC38Q5R3I4 469 aa29.53■■■□□ 2.32
CDKN2A-201ENST00000304494 TCP11Q8WWU5 503 aa29.53■■■□□ 2.32
CDKN2A-201ENST00000304494 PSPC1Q8WXF1 523 aaKnown RBP29.53■■■□□ 2.32
CDKN2A-201ENST00000304494 DACT1Q9NYF0 836 aa29.53■■■□□ 2.32
CDKN2A-201ENST00000304494 U2AF2P26368 475 aaKnown RBP eCLIP29.52■■■□□ 2.32
CDKN2A-201ENST00000304494 EMC2Q15006 297 aa29.52■■■□□ 2.32
CDKN2A-201ENST00000304494 ZNF174Q15697 407 aa29.52■■■□□ 2.32
CDKN2A-201ENST00000304494 TIGD5Q53EQ6 642 aa29.52■■■□□ 2.32
CDKN2A-201ENST00000304494 NAALADL2Q58DX5 795 aa29.52■■■□□ 2.32
CDKN2A-201ENST00000304494 HLA-CQ95604 372 aa29.52■■■□□ 2.32
CDKN2A-201ENST00000304494 NLRP4Q96MN2 994 aa29.52■■■□□ 2.32
CDKN2A-201ENST00000304494 LMAN2LQ9H0V9 348 aa29.52■■■□□ 2.32
CDKN2A-201ENST00000304494 CHST12Q9NRB3 414 aa29.52■■■□□ 2.32
CDKN2A-201ENST00000304494 COL4A3BPQ9Y5P4 624 aa29.52■■■□□ 2.32
CDKN2A-201ENST00000304494 HOXA2O43364 376 aa29.51■■■□□ 2.31
CDKN2A-201ENST00000304494 OR52Z1P0C646 297 aa29.51■■■□□ 2.31
CDKN2A-201ENST00000304494 FGFR4P22455 802 aa29.51■■■□□ 2.31
CDKN2A-201ENST00000304494 P2RX5Q93086 422 aa29.51■■■□□ 2.31
CDKN2A-201ENST00000304494 CCDC43Q96MW1 224 aaKnown RBP29.51■■■□□ 2.31
CDKN2A-201ENST00000304494 ANKEF1Q9NU02 776 aa29.51■■■□□ 2.31
CDKN2A-201ENST00000304494 POTEMA6NI47 508 aa29.5■■■□□ 2.31
CDKN2A-201ENST00000304494 TBKBP1A7MCY6 615 aa29.5■■■□□ 2.31
CDKN2A-201ENST00000304494 GATMP50440 423 aa29.5■■■□□ 2.31
CDKN2A-201ENST00000304494 KSR1Q8IVT5 923 aa29.5■■■□□ 2.31
CDKN2A-201ENST00000304494 PRPF31Q8WWY3 499 aaKnown RBP29.5■■■□□ 2.31
CDKN2A-201ENST00000304494 TMEM143Q96AN5 459 aa29.5■■■□□ 2.31
CDKN2A-201ENST00000304494 MTRQ99707 1265 aa29.5■■■□□ 2.31
CDKN2A-201ENST00000304494 ZBTB39O15060 712 aa29.49■■■□□ 2.31
CDKN2A-201ENST00000304494 ASAP2O43150 1006 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms