RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 LINC01465Q8N7H1 131 aa12.19□□□□□ -0.46
HMGN1P35-201ENST00000303758 CLP1Q92989 425 aaKnown RBP12.19□□□□□ -0.46
HMGN1P35-201ENST00000303758 SH2D3AQ9BRG2 576 aa12.19□□□□□ -0.46
HMGN1P35-201ENST00000303758 NIFKQ9BYG3 293 aaKnown RBP12.19□□□□□ -0.46
HMGN1P35-201ENST00000303758 RGS18Q9NS28 235 aa12.19□□□□□ -0.46
HMGN1P35-201ENST00000303758 VAV3Q9UKW4 847 aa12.19□□□□□ -0.46
HMGN1P35-201ENST00000303758 MRPL42Q9Y6G3 142 aaKnown RBP12.19□□□□□ -0.46
HMGN1P35-201ENST00000303758 PLXNA4Q9HCM2 1894 aa12.19□□□□□ -0.46
HMGN1P35-201ENST00000303758 TBKBP1A7MCY6 615 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 BTBD18B2RXH4 712 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 TNFRSF10AO00220 468 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 EML1O00423 815 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 P4HBP07237 508 aaKnown RBP12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 EIF4BP23588 611 aaKnown RBP12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 POLGP54098 1239 aaPredicted RBP12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 CDC42EP1Q00587 391 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 GNL2Q13823 731 aaKnown RBP12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 TARBP2Q15633 366 aaKnown RBP12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 CALCRLQ16602 461 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 FAM184AQ8NB25 1140 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 SLC7A3Q8WY07 619 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 C8orf76Q96K31 380 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 CCDC43Q96MW1 224 aaKnown RBP12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 LXNQ9BS40 222 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 GCOM2Q9BZD3 368 aaPredicted RBP12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 LMAN2LQ9H0V9 348 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 NSUN3Q9H649 340 aaKnown RBP12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 UBE2ZQ9H832 354 aaPredicted RBP12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 ATP6V0A4Q9HBG4 840 aa12.18□□□□□ -0.46
HMGN1P35-201ENST00000303758 MUC3AQ02505 3323 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 HOXA2O43364 376 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 NEMFO60524 1076 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 MAFO75444 373 aaPredicted RBP12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 DARSP14868 501 aaKnown RBP12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 SFPQP23246 707 aaKnown RBP eCLIP12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 GATMP50440 423 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 GUCY1B3Q02153 619 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 CYP4A11Q02928 519 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 EPHA7Q15375 998 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 C8orf34Q49A92 452 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 TCEAL5Q5H9L2 206 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 ANO5Q75V66 913 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 RHPN2Q8IUC4 686 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 EXOC8Q8IYI6 725 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 ABI1Q8IZP0 508 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 RNF169Q8NCN4 708 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 HAS1Q92839 578 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 TNFRSF25Q93038 417 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 P2RX5Q93086 422 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 DYDC2Q96IM9 177 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 CEP170P1Q96L14 293 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 ZSCAN31Q96LW9 406 aaPredicted RBP12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 NLRP4Q96MN2 994 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 LLPHQ9BRT6 129 aaKnown RBP12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 INO80BQ9C086 356 aaPredicted RBP12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 ADAMTS10Q9H324 1103 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 UPF2Q9HAU5 1272 aaKnown RBP12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 CYP26B1Q9NR63 512 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 SH2B1Q9NRF2 756 aaPredicted RBP12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 AAASQ9NRG9 546 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 TMEM161AQ9NX61 479 aa12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 SUCLA2Q9P2R7 463 aaPredicted RBP12.17□□□□□ -0.46
HMGN1P35-201ENST00000303758 A0A087WZ62 844 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 C9IYK1 514 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 GRM6O15303 877 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 LINC00271P0C7V0 271 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 ATP2B1P20020 1258 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 FGFR4P22455 802 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 KCNA5P22460 613 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 HMGN5P82970 282 aaKnown RBP12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 ST3GAL1Q11201 340 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 DRP2Q13474 957 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 NAALADL2Q58DX5 795 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 OTUD6AQ7L8S5 288 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 ZNF410Q86VK4 478 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 CRIPAKQ8N1N5 446 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 PPP2R3CQ969Q6 453 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 FDXACB1Q9BRP7 624 aaPredicted RBP12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 ELAC1Q9H777 363 aaKnown RBP12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 ZSWIM4Q9H7M6 989 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 ALG13Q9NP73 1137 aaKnown RBP12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 BMP2KQ9NSY1 1161 aaPredicted RBP12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 DACT1Q9NYF0 836 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 PCDHA12Q9UN75 941 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 PPME1Q9Y570 386 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 PCDHB12Q9Y5F1 795 aa12.16□□□□□ -0.46
HMGN1P35-201ENST00000303758 IGKV6-21A0A0C4DH24 114 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 STBD1O95210 358 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 FGFR1P11362 822 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 BMP1P13497 986 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 YWHABP31946 246 aaKnown RBP12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 RFC5P40937 340 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 TXKP42681 527 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 NPEPPSP55786 919 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 CTTNQ14247 550 aaKnown RBP12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 DSC3Q14574 896 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 XKR9Q5GH70 373 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 FAM102BQ5T8I3 360 aa12.15□□□□□ -0.46
HMGN1P35-201ENST00000303758 CATSPER4Q7RTX7 472 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms