RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 PRAMEF19Q5SWL8 479 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 SLC17A8Q8NDX2 589 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 OR6J1Q8NGC5 347 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 CEP63Q96MT8 703 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 POLR3FQ9H1D9 316 aaPredicted RBP14.3□□□□□ -0.12
CCDC7-202ENST00000302316 DHX33Q9H6R0 707 aaKnown RBP14.3□□□□□ -0.12
CCDC7-202ENST00000302316 C17orf75Q9HAS0 396 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 IMPACTQ9P2X3 320 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 ZSWIM8A7E2V4 1837 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 CCDC169A6NNP5 214 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 SLC16A4O15374 487 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 TBC1D8O95759 1140 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 LGALS2P05162 132 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 NR2F2P24468 414 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 SMTNP53814 917 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 NCKAP1LP55160 1127 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 PLCB4Q15147 1175 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 TARBP2Q15633 366 aaKnown RBP14.3□□□□□ -0.12
CCDC7-202ENST00000302316 CEP89Q96ST8 783 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 TUBGCP2Q9BSJ2 902 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 STRA6Q9BX79 667 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 ERAP1Q9NZ08 941 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 TRPC6Q9Y210 931 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 PPME1Q9Y570 386 aa14.3□□□□□ -0.12
CCDC7-202ENST00000302316 CETN3O15182 167 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 ADCY6O43306 1168 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 ZNF865P0CJ78 1059 aaPredicted RBP14.29□□□□□ -0.12
CCDC7-202ENST00000302316 NPTX2P47972 431 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 RTP1P59025 263 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 ADAM9Q13443 819 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 CCDC40Q4G0X9 1142 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 HS2ST1Q7LGA3 356 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 HAUS6Q7Z4H7 955 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 ZC3H3Q8IXZ2 948 aaKnown RBP14.29□□□□□ -0.12
CCDC7-202ENST00000302316 SYCP3Q8IZU3 236 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 BSNDQ8WZ55 320 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 IFT74Q96LB3 600 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 ST6GALNAC4Q9H4F1 302 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 KMT5AQ9NQR1 393 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 LGALS16A8MUM7 142 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 TGFB1I1O43294 461 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 ZNF286BP0CG31 522 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 TBC1D8BQ0IIM8 1120 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 SPECC1LQ69YQ0 1117 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 SPIRE2Q8WWL2 714 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 TMEM143Q96AN5 459 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 ZNF830Q96NB3 372 aaPredicted RBP14.29□□□□□ -0.12
CCDC7-202ENST00000302316 ACCSQ96QU6 501 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 KIFC3Q9BVG8 833 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 NOC4LQ9BVI4 516 aaKnown RBP14.29□□□□□ -0.12
CCDC7-202ENST00000302316 GBP3Q9H0R5 595 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 IKZF4Q9H2S9 585 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 TMEM206Q9H813 350 aa14.29□□□□□ -0.12
CCDC7-202ENST00000302316 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC7-202ENST00000302316 CLIC2O15247 247 aa14.28□□□□□ -0.12
CCDC7-202ENST00000302316 GNA14O95837 355 aa14.28□□□□□ -0.12
CCDC7-202ENST00000302316 NR3C1P04150 777 aa14.28□□□□□ -0.12
CCDC7-202ENST00000302316 MMP3P08254 477 aa14.28□□□□□ -0.12
CCDC7-202ENST00000302316 GSDMDP57764 484 aa14.28□□□□□ -0.12
CCDC7-202ENST00000302316 GTF2BQ00403 316 aa14.28□□□□□ -0.12
CCDC7-202ENST00000302316 UBXN1Q04323 297 aa14.28□□□□□ -0.12
CCDC7-202ENST00000302316 KIF22Q14807 665 aa14.28□□□□□ -0.12
CCDC7-202ENST00000302316 HBP1O60381 514 aa14.27□□□□□ -0.12
CCDC7-202ENST00000302316 MAFO75444 373 aaPredicted RBP14.27□□□□□ -0.12
CCDC7-202ENST00000302316 RPL13P26373 211 aaKnown RBP14.27□□□□□ -0.12
CCDC7-202ENST00000302316 SP3Q02447 781 aa14.27□□□□□ -0.12
CCDC7-202ENST00000302316 TMEM161BQ8NDZ6 487 aa14.27□□□□□ -0.12
CCDC7-202ENST00000302316 GOLGA5Q8TBA6 731 aa14.27□□□□□ -0.12
CCDC7-202ENST00000302316 ZNF215Q9UL58 517 aaPredicted RBP14.27□□□□□ -0.12
CCDC7-202ENST00000302316 GABRQQ9UN88 632 aa14.27□□□□□ -0.12
CCDC7-202ENST00000302316 DENND3A2RUS2 1198 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 DYNC1LI2O43237 492 aaPredicted RBP14.27□□□□□ -0.13
CCDC7-202ENST00000302316 PPFIA4O75335 1185 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 TRPA1O75762 1119 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 XRCC5P13010 732 aaKnown RBP14.27□□□□□ -0.13
CCDC7-202ENST00000302316 PBX1P40424 430 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 VEGFBP49765 207 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 FLT3LGP49771 235 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 PRKCZQ05513 592 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 MAN2A1Q16706 1144 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 TLK2Q86UE8 772 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 HVCN1Q96D96 273 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 KCNF1Q9H3M0 494 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 AGPAT3Q9NRZ7 376 aa14.27□□□□□ -0.13
CCDC7-202ENST00000302316 GNEQ9Y223 722 aaKnown RBP14.27□□□□□ -0.13
CCDC7-202ENST00000302316 ZBTB42B2RXF5 422 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 IGHA2P01877 340 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 HOXD8P13378 290 aaPredicted RBP14.26□□□□□ -0.13
CCDC7-202ENST00000302316 ARL2P36404 184 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 MAP2K2P36507 400 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 ARID5BQ14865 1188 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 PPP2R5AQ15172 486 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 NFIL3Q16649 462 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 DGKDQ16760 1214 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 VWA3BQ502W6 1294 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 MIIPQ5JXC2 388 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 CEP135Q66GS9 1140 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 EXOC8Q8IYI6 725 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 CCDC150Q8NCX0 1101 aa14.26□□□□□ -0.13
CCDC7-202ENST00000302316 ASAP3Q8TDY4 903 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms