RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 NFX1Q12986 1120 aaKnown RBP13.2□□□□□ -0.3
ABCA3-201ENST00000301732 RESTQ13127 1097 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 PBKQ96KB5 322 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 CNOT8Q9UFF9 292 aaKnown RBP13.2□□□□□ -0.3
ABCA3-201ENST00000301732 TEKT2Q9UIF3 430 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 FBXO2Q9UK22 296 aaPredicted RBP13.2□□□□□ -0.3
ABCA3-201ENST00000301732 KDM5BQ9UGL1 1544 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 E9PMD0 336 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 ALS2CLQ60I27 953 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 RASSF3Q86WH2 238 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 PDIK1LQ8N165 341 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 SLC7A3Q8WY07 619 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 TRAF3IP3Q9Y228 551 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 LONRF1Q17RB8 773 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 TMEM270Q6UE05 265 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 DHTKD1Q96HY7 919 aaPredicted RBP13.2□□□□□ -0.3
ABCA3-201ENST00000301732 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 CASS4Q9NQ75 786 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 KLC4Q9NSK0 619 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 ASAP1Q9ULH1 1129 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 DRP2Q13474 957 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 ZNF280CQ8ND82 737 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 STK24Q9Y6E0 443 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 FANCAO15360 1455 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 RWDD2BP57060 319 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 FLCNQ8NFG4 579 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 KLC2Q9H0B6 622 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 CYFIP1Q7L576 1253 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 EXOC8Q8IYI6 725 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 MSTO1Q9BUK6 570 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 CD248Q9HCU0 757 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 NRBP2Q9NSY0 501 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 SNX5Q9Y5X3 404 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 UBE4BO95155 1302 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 ZBED6P86452 979 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 CYGBQ8WWM9 190 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 ADCY2Q08462 1091 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 KIAA1841Q6NSI8 718 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 LAYNQ6UX15 382 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 NAF1Q96HR8 494 aaKnown RBP13.19□□□□□ -0.3
ABCA3-201ENST00000301732 UNC45AQ9H3U1 944 aa13.19□□□□□ -0.3
ABCA3-201ENST00000301732 CARSP49589 748 aaKnown RBP13.18□□□□□ -0.3
ABCA3-201ENST00000301732 LVRNQ6Q4G3 990 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 SCN4BQ8IWT1 228 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 FOXP1Q9H334 677 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-201ENST00000301732 OCM2P0CE71 109 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 OCMP0CE72 109 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-201ENST00000301732 VSNL1P62760 191 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 PPP2R2AP63151 447 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 C4orf33Q8N1A6 199 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 FAM213AQ9BRX8 229 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 TRIM51Q9BSJ1 452 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 LRRC1Q9BTT6 524 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 NUP85Q9BW27 656 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 FSD1LQ9BXM9 530 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 SIK2Q9H0K1 926 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 CHUKO15111 745 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 SNX2O60749 519 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 DCTN3O75935 186 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 MORF4L2Q15014 288 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 OSBPL9Q96SU4 736 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 LMCD1Q9NZU5 365 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 ATP6V1B1P15313 513 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 ARFIP2P53365 341 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 COPS2P61201 443 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 FASTKD1Q53R41 847 aaKnown RBP13.18□□□□□ -0.3
ABCA3-201ENST00000301732 DPF2Q92785 391 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 TRPC1P48995 793 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 DMC1Q14565 340 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 TMEM154Q6P9G4 183 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 WDR75Q8IWA0 830 aaKnown RBP13.18□□□□□ -0.3
ABCA3-201ENST00000301732 TRIM42Q8IWZ5 723 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 CCDC33Q8N5R6 958 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 GOLPH3Q9H4A6 298 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 SLC16A4O15374 487 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 SKAP2O75563 359 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-201ENST00000301732 HSPA6P17066 643 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 ERFEQ4G0M1 354 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 USP17L6PQ6QN14 398 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 PARVGQ9HBI0 331 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 NDE1Q9NXR1 346 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 SUN2Q9UH99 717 aa13.18□□□□□ -0.3
ABCA3-201ENST00000301732 IKBKBO14920 756 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 PPP2R5BQ15173 497 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 AOC3Q16853 763 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 SLC30A5Q8TAD4 765 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 TTC25Q96NG3 672 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 AMNQ9BXJ7 453 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 GIMAP4Q9NUV9 329 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 A0A1W2PQ27 194 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms