RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 NKX1-2Q9UD57 310 aaPredicted RBP14.08□□□□□ -0.15
TVP23A-201ENST00000299866 SAP30BPQ9UHR5 308 aaKnown RBP14.08□□□□□ -0.15
TVP23A-201ENST00000299866 RASAL2Q9UJF2 1139 aa14.08□□□□□ -0.15
TVP23A-201ENST00000299866 KIAA1024Q9UPX6 916 aa14.08□□□□□ -0.15
TVP23A-201ENST00000299866 PTPN22Q9Y2R2 807 aa14.08□□□□□ -0.15
TVP23A-201ENST00000299866 TMEM120BA0PK00 339 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 DDX3YO15523 660 aaKnown RBP14.08□□□□□ -0.16
TVP23A-201ENST00000299866 HIP1RO75146 1068 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 SNUPNO95149 360 aaKnown RBP14.08□□□□□ -0.16
TVP23A-201ENST00000299866 PCK1P35558 622 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 RNASELQ05823 741 aaKnown RBP14.08□□□□□ -0.16
TVP23A-201ENST00000299866 RMDN2Q96LZ7 410 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 CPSF2Q9P2I0 782 aaKnown RBP14.08□□□□□ -0.16
TVP23A-201ENST00000299866 MTRF1LQ9UGC7 380 aaKnown RBP14.08□□□□□ -0.16
TVP23A-201ENST00000299866 NIP7Q9Y221 180 aaKnown RBP eCLIP14.08□□□□□ -0.16
TVP23A-201ENST00000299866 IGSF9BQ9UPX0 1349 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 DPPA5A6NC42 116 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 MAPK7Q13164 816 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 LLGL1Q15334 1064 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 TMEM119Q4V9L6 283 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 SPDYCQ5MJ68 293 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 ARHGEF2Q92974 986 aaKnown RBP14.08□□□□□ -0.16
TVP23A-201ENST00000299866 KCTD10Q9H3F6 313 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 CCDC134Q9H6E4 229 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 GRHL1Q9NZI5 618 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 ARL2BPQ9Y2Y0 163 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 KIF13AQ9H1H9 1805 aa14.08□□□□□ -0.16
TVP23A-201ENST00000299866 FAM187AA6NFU0 413 aa14.07□□□□□ -0.16
TVP23A-201ENST00000299866 LUC7L3O95232 432 aaKnown RBP14.07□□□□□ -0.16
TVP23A-201ENST00000299866 ACSL3O95573 720 aa14.07□□□□□ -0.16
TVP23A-201ENST00000299866 ATP4AP20648 1035 aa14.07□□□□□ -0.16
TVP23A-201ENST00000299866 C12orf60Q5U649 245 aa14.07□□□□□ -0.16
TVP23A-201ENST00000299866 MARCH10Q8NA82 808 aaPredicted RBP14.07□□□□□ -0.16
TVP23A-201ENST00000299866 ALG3Q92685 438 aa14.07□□□□□ -0.16
TVP23A-201ENST00000299866 STMN4Q9H169 189 aaPredicted RBP14.07□□□□□ -0.16
TVP23A-201ENST00000299866 ZMYND8Q9ULU4 1186 aaPredicted RBP14.07□□□□□ -0.16
TVP23A-201ENST00000299866 KLHL33A6NCF5 533 aa14.07□□□□□ -0.16
TVP23A-201ENST00000299866 RIPK2O43353 540 aa14.07□□□□□ -0.16
TVP23A-201ENST00000299866 SMIM24O75264 130 aa14.07□□□□□ -0.16
TVP23A-201ENST00000299866 XRCC5P13010 732 aaKnown RBP14.07□□□□□ -0.16
TVP23A-201ENST00000299866 CASP5P51878 434 aa14.07□□□□□ -0.16
TVP23A-201ENST00000299866 GBP7Q8N8V2 638 aaPredicted RBP14.07□□□□□ -0.16
TVP23A-201ENST00000299866 LNX1Q8TBB1 728 aaPredicted RBP14.07□□□□□ -0.16
TVP23A-201ENST00000299866 CTNNBL1Q8WYA6 563 aaPredicted RBP14.07□□□□□ -0.16
TVP23A-201ENST00000299866 ETAA1Q9NY74 926 aa14.07□□□□□ -0.16
TVP23A-201ENST00000299866 OAS1P00973 400 aaKnown RBP14.06□□□□□ -0.16
TVP23A-201ENST00000299866 GH1P01241 217 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 MARSP56192 900 aaKnown RBP14.06□□□□□ -0.16
TVP23A-201ENST00000299866 SEPT2Q15019 361 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 DNAJC17Q9NVM6 304 aaKnown RBP14.06□□□□□ -0.16
TVP23A-201ENST00000299866 GCNT4Q9P109 453 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 FRMPD2Q68DX3 1309 aaPredicted RBP14.06□□□□□ -0.16
TVP23A-201ENST00000299866 PLA2G4BP0C869 781 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 RWDD2BP57060 319 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 MXRA7P84157 204 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 UBE4AQ14139 1066 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 PDIA5Q14554 519 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 PLS1Q14651 629 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 UBE2SQ16763 222 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 DPY19L2P1Q6NXN4 242 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 DZIP1Q86YF9 867 aaKnown RBP14.06□□□□□ -0.16
TVP23A-201ENST00000299866 ARHGEF26Q96DR7 871 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 NAP1L3Q99457 506 aaPredicted RBP14.06□□□□□ -0.16
TVP23A-201ENST00000299866 TSC22D3Q99576 134 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 DDX23Q9BUQ8 820 aaKnown RBP14.06□□□□□ -0.16
TVP23A-201ENST00000299866 CTNNAL1Q9UBT7 734 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 A0A0A6YYK5 440 aaPredicted RBP14.06□□□□□ -0.16
TVP23A-201ENST00000299866 A6NHS1 94 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 H0Y3Z8 333 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 EDIL3O43854 480 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 NEFHP12036 1026 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 IL6STP40189 918 aaPredicted RBP14.06□□□□□ -0.16
TVP23A-201ENST00000299866 RAD23BP54727 409 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 SLC30A9Q6PML9 568 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 TBC1D16Q8TBP0 767 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 SPZ1Q9BXG8 430 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 TRIM7Q9C029 511 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 RXFP1Q9HBX9 757 aa14.06□□□□□ -0.16
TVP23A-201ENST00000299866 CACNA1SQ13698 1873 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 ARAP2Q8WZ64 1704 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 POTEB3A0JP26 581 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 POTECB2RU33 542 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 ANKRD63C9JTQ0 380 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 GNAT1P11488 350 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 PRKCIP41743 596 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 KCNJ1P48048 391 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 DHX34Q14147 1143 aaKnown RBP14.05□□□□□ -0.16
TVP23A-201ENST00000299866 POTEBQ6S5H4 581 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 KSR1Q8IVT5 923 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 LZTS2Q9BRK4 669 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 KLHL14Q9P2G3 628 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 CHORDC1Q9UHD1 332 aaPredicted RBP14.05□□□□□ -0.16
TVP23A-201ENST00000299866 CNOT7Q9UIV1 285 aaKnown RBP14.05□□□□□ -0.16
TVP23A-201ENST00000299866 PCDHB13Q9Y5F0 798 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 PCDHA2Q9Y5H9 948 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 SPDYE5A6NIY4 337 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 CLIC2O15247 247 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 PECAM1P16284 738 aaPredicted RBP14.05□□□□□ -0.16
TVP23A-201ENST00000299866 STAT1P42224 750 aa14.05□□□□□ -0.16
TVP23A-201ENST00000299866 CASP4P49662 377 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms