RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 DDX3XO00571 662 aaKnown RBP eCLIP12.31□□□□□ -0.441e-7■■■■■ 37.2
TRUB1-201ENST00000298746 KRT16P08779 473 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 PAEPP09466 180 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 SSR1P43307 286 aaKnown RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 CDK8P49336 464 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 CASP4P49662 377 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 FXR2P51116 673 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 RBBP5Q15291 538 aaKnown RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 SBK1Q52WX2 424 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 SPATA21Q7Z572 469 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 LRRC57Q8N9N7 239 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 RFFLQ8WZ73 363 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 SPZ1Q9BXG8 430 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 PARP2Q9UGN5 583 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 KDM3AQ9Y4C1 1321 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 FOXO6A8MYZ6 492 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 PPFIA2O75334 1257 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 LDHCP07864 332 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 NEFHP12036 1026 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 BRAFP15056 766 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 LMNB1P20700 586 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 PDIA5Q14554 519 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 DRAP1Q14919 205 aaPredicted RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 ZNF746Q6NUN9 644 aaPredicted RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 SRRM1Q8IYB3 904 aaKnown RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 SYCP3Q8IZU3 236 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 GBP7Q8N8V2 638 aaPredicted RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 TGS1Q96RS0 853 aaKnown RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 PSTPIP2Q9H939 334 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 ERVK-5Q9HDB9 667 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 BSDC1Q9NW68 430 aaPredicted RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 DNAJC12Q9UKB3 198 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 TJP1Q07157 1748 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 THAP12O43422 761 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 SNX3O60493 162 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 LUC7L3O95232 432 aaKnown RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 MYBP10242 640 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 MAPK7Q13164 816 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 SLMAPQ14BN4 828 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 PRR16Q569H4 304 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 C3orf67Q6ZVT6 689 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 DNAJC19Q96DA6 116 aa12.31□□□□□ -0.44
TRUB1-201ENST00000298746 ZNF317Q96PQ6 595 aaPredicted RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 RTCBQ9Y3I0 505 aaKnown RBP12.31□□□□□ -0.44
TRUB1-201ENST00000298746 CES2O00748 559 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 FAM13AO94988 1023 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 NR3C1P04150 777 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 RASA1P20936 1047 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 MMP13P45452 471 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 RAD23BP54727 409 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 KCNQ4P56696 695 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 PTENP60484 403 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 NCALDP61601 193 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 SEPT7Q16181 437 aaKnown RBP12.3□□□□□ -0.44
TRUB1-201ENST00000298746 KNOP1Q1ED39 458 aaKnown RBP12.3□□□□□ -0.44
TRUB1-201ENST00000298746 ANKRD20A2Q5SQ80 823 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 ANKRD20A1Q5TYW2 823 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 ANKRD20A3Q5VUR7 823 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 CRELD2Q6UXH1 353 aaPredicted RBP12.3□□□□□ -0.44
TRUB1-201ENST00000298746 CAPN12Q6ZSI9 719 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 ARHGAP27Q6ZUM4 889 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 SMIM5Q71RC9 77 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 ERMNQ8TAM6 284 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 RBM46Q8TBY0 533 aaKnown RBP12.3□□□□□ -0.44
TRUB1-201ENST00000298746 TLCD1Q96CP7 247 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 LRRD1A4D1F6 860 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 FAM187AA6NFU0 413 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 USP17L15C9J2P7 530 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 USP17L13C9JLJ4 530 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 USP17L11C9JVI0 530 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 USP17L18D6R9N7 530 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 USP17L22D6RA61 530 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 USP17L17D6RBQ6 530 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 USP17L19D6RCP7 530 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 USP17L20D6RJB6 530 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 ATP5DP30049 168 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 CASP5P51878 434 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 USP17L24Q0WX57 530 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 SEPT2Q15019 361 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 TNIP1Q15025 636 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 THEMIS2Q5TEJ8 643 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 USP17L6PQ6QN14 398 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 MYCT1Q8N699 235 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 GPR101Q96P66 508 aaPredicted RBP12.3□□□□□ -0.44
TRUB1-201ENST00000298746 MTMR9Q96QG7 549 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 THAP2Q9H0W7 228 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 ARL2BPQ9Y2Y0 163 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 PKD1L3Q7Z443 1732 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 AKAP3O75969 853 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 MUM1Q2TAK8 710 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 COBLL1Q53SF7 1204 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 SEPT14Q6ZU15 432 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 HS2ST1Q7LGA3 356 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 TXNRD3Q86VQ6 643 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 NBPF5PQ86XG9 351 aaPredicted RBP12.3□□□□□ -0.44
TRUB1-201ENST00000298746 FAM186BQ8IYM0 893 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 PARD3BQ8TEW8 1205 aa12.3□□□□□ -0.44
TRUB1-201ENST00000298746 CENPTQ96BT3 561 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms