RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ZNF746Q6NUN9 644 aaPredicted RBP6.64□□□□□ -1.35
SSX3-201ENST00000298396 CXCL17Q6UXB2 119 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 USP49Q70CQ1 688 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 IGSF22Q8N9C0 903 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 NAP1L4Q99733 375 aaKnown RBP6.64□□□□□ -1.35
SSX3-201ENST00000298396 SDF4Q9BRK5 362 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 TEKT3Q9BXF9 490 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 AP5M1Q9H0R1 490 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 TTC12Q9H892 705 aaPredicted RBP6.64□□□□□ -1.35
SSX3-201ENST00000298396 MLXIPQ9HAP2 919 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 AAASQ9NRG9 546 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 TBC1D22BQ9NU19 505 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 FBXO2Q9UK22 296 aaPredicted RBP6.64□□□□□ -1.35
SSX3-201ENST00000298396 MORC2Q9Y6X9 1032 aaPredicted RBP6.64□□□□□ -1.35
SSX3-201ENST00000298396 EMSYQ7Z589 1322 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 GBF1Q92538 1859 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 A0A087X0B3 334 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 TMEM150BA6NC51 233 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 TMEM229AB2RXF0 380 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 DNM1LO00429 736 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 ZBTB39O15060 712 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 SPINT1O43278 529 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 MED24O75448 989 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 F2P00734 622 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 TFRCP02786 760 aaKnown RBP6.63□□□□□ -1.35
SSX3-201ENST00000298396 MYL3P08590 195 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 PDIA4P13667 645 aaKnown RBP6.63□□□□□ -1.35
SSX3-201ENST00000298396 CDC25AP30304 524 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 HOXC8P31273 242 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 TECP42680 631 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 PTGIRP43119 386 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 NUCB2P80303 420 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 KRT76Q01546 638 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 SNX17Q15036 470 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 PLCB4Q15147 1175 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 DGKDQ16760 1214 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 UTP14CQ5TAP6 766 aaKnown RBP6.63□□□□□ -1.35
SSX3-201ENST00000298396 NCAPH2Q6IBW4 605 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 MIER3Q7Z3K6 550 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 SLFN12Q8IYM2 578 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 SLC43A3Q8NBI5 491 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 GIMAP8Q8ND71 665 aaPredicted RBP6.63□□□□□ -1.35
SSX3-201ENST00000298396 AFAP1L1Q8TED9 768 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 SEPT1Q8WYJ6 367 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 TNPO1Q92973 898 aaKnown RBP6.63□□□□□ -1.35
SSX3-201ENST00000298396 FERMT2Q96AC1 680 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 DYDC2Q96IM9 177 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 PAWRQ96IZ0 340 aaKnown RBP6.63□□□□□ -1.35
SSX3-201ENST00000298396 CEP89Q96ST8 783 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 HSD17B14Q9BPX1 270 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 TSEN34Q9BSV6 310 aaKnown RBP6.63□□□□□ -1.35
SSX3-201ENST00000298396 RNPEPQ9H4A4 650 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 DISC1Q9NRI5 854 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 DNAAF2Q9NVR5 837 aaKnown RBP6.63□□□□□ -1.35
SSX3-201ENST00000298396 RGL1Q9NZL6 768 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 CHMP5Q9NZZ3 219 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 RCOR1Q9UKL0 485 aa6.63□□□□□ -1.35
SSX3-201ENST00000298396 A0A087WWV3 80 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 VWA3AA6NCI4 1184 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 CCDC85CA6NKD9 419 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 WDR64B1ANS9 1081 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 KBTBD13C9JR72 458 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 LAD1O00515 517 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 NOP56O00567 594 aaKnown RBP6.62□□□□□ -1.35
SSX3-201ENST00000298396 SPTLC2O15270 562 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 PPFIA4O75335 1185 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 SLITRK3O94933 977 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 YEATS4O95619 227 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 CPT1AP50416 773 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 CDK7P50613 346 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 JAK3P52333 1124 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 ADAM17P78536 824 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 ZNF200P98182 395 aaPredicted RBP6.62□□□□□ -1.35
SSX3-201ENST00000298396 CYP4A11Q02928 519 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 GRB10Q13322 594 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 CTTNQ14247 550 aaKnown RBP6.62□□□□□ -1.35
SSX3-201ENST00000298396 EPHA7Q15375 998 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 LRRC26Q2I0M4 334 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 SPECC1Q5M775 1068 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 ARL6IP4Q66PJ3 421 aaKnown RBP6.62□□□□□ -1.35
SSX3-201ENST00000298396 SWSAP1Q6NVH7 229 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 KCNK18Q7Z418 384 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 TRIM46Q7Z4K8 759 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 RNF180Q86T96 592 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 SMAP1Q8IYB5 467 aaPredicted RBP6.62□□□□□ -1.35
SSX3-201ENST00000298396 ARRDC4Q8NCT1 418 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 RDM1Q8NG50 284 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 LEO1Q8WVC0 666 aaPredicted RBP6.62□□□□□ -1.35
SSX3-201ENST00000298396 TRAPPC12Q8WVT3 735 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 WNT8BQ93098 351 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 ZBTB10Q96DT7 871 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 ZNF396Q96N95 335 aaPredicted RBP6.62□□□□□ -1.35
SSX3-201ENST00000298396 PNMA5Q96PV4 448 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 EIF2AK1Q9BQI3 630 aaKnown RBP6.62□□□□□ -1.35
SSX3-201ENST00000298396 MTG1Q9BT17 334 aaPredicted RBP6.62□□□□□ -1.35
SSX3-201ENST00000298396 CSRNP2Q9H175 543 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 GABBR1Q9UBS5 961 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 ZMIZ1Q9ULJ6 1067 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 PCDHA7Q9UN72 937 aa6.62□□□□□ -1.35
SSX3-201ENST00000298396 PCDHA12Q9UN75 941 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms