RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 PAN2Q504Q3 1202 aaKnown RBP18.38■□□□□ 0.53
NPM1-201ENST00000296930 FAM228AQ86W67 206 aa18.38■□□□□ 0.53
NPM1-201ENST00000296930 ETNPPLQ8TBG4 499 aa18.38■□□□□ 0.53
NPM1-201ENST00000296930 PABPC5Q96DU9 382 aaKnown RBP18.38■□□□□ 0.53
NPM1-201ENST00000296930 DDX25Q9UHL0 483 aaKnown RBP18.38■□□□□ 0.53
NPM1-201ENST00000296930 KIF3AQ9Y496 699 aa18.38■□□□□ 0.53
NPM1-201ENST00000296930 C9IYK1 514 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 MMP1P03956 469 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 NLRP11P59045 1033 aaKnown RBP18.37■□□□□ 0.53
NPM1-201ENST00000296930 TBC1D8BQ0IIM8 1120 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 COL19A1Q14993 1142 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 B3GNT9Q6UX72 402 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 LRRC71Q8N4P6 559 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 PLAGL2Q9UPG8 496 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 MTMR6Q9Y217 621 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 IBSPP21815 317 aaPredicted RBP18.37■□□□□ 0.53
NPM1-201ENST00000296930 LETM2Q2VYF4 491 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 PUS10Q3MIT2 529 aaKnown RBP18.37■□□□□ 0.53
NPM1-201ENST00000296930 XKR3Q5GH77 459 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.37■□□□□ 0.53
NPM1-201ENST00000296930 NEK9Q8TD19 979 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 WASF1Q92558 559 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 NIFKQ9BYG3 293 aaKnown RBP18.37■□□□□ 0.53
NPM1-201ENST00000296930 ADAMTS10Q9H324 1103 aa18.37■□□□□ 0.53
NPM1-201ENST00000296930 GCFC2P16383 781 aaKnown RBP18.36■□□□□ 0.53
NPM1-201ENST00000296930 EIF4BP23588 611 aaKnown RBP18.36■□□□□ 0.53
NPM1-201ENST00000296930 GATMP50440 423 aa18.36■□□□□ 0.53
NPM1-201ENST00000296930 TARBP2Q15633 366 aaKnown RBP18.36■□□□□ 0.53
NPM1-201ENST00000296930 NEK8Q86SG6 692 aa18.36■□□□□ 0.53
NPM1-201ENST00000296930 ALG13Q9NP73 1137 aaKnown RBP18.36■□□□□ 0.53
NPM1-201ENST00000296930 SEPT9Q9UHD8 586 aaPredicted RBP18.36■□□□□ 0.53
NPM1-201ENST00000296930 FAM189BP81408 668 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 DSC3Q14574 896 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 PPP4R3AQ6IN85 833 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 PTCRAQ6ISU1 281 aaPredicted RBP18.35■□□□□ 0.53
NPM1-201ENST00000296930 EP400NLQ6ZTU2 488 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 FAM20AQ96MK3 541 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 NAP1L4Q99733 375 aaKnown RBP18.35■□□□□ 0.53
NPM1-201ENST00000296930 ELAC1Q9H777 363 aaKnown RBP18.35■□□□□ 0.53
NPM1-201ENST00000296930 TMEM161AQ9NX61 479 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 VPS37CA5D8V6 355 aaPredicted RBP18.35■□□□□ 0.53
NPM1-201ENST00000296930 SLC37A4O43826 429 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 ITGB1P05556 798 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 ZSCAN22P10073 491 aaPredicted RBP18.35■□□□□ 0.53
NPM1-201ENST00000296930 PDIA4P13667 645 aaKnown RBP18.35■□□□□ 0.53
NPM1-201ENST00000296930 GPC3P51654 580 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 CDC42EP1Q00587 391 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 KLHL23Q8NBE8 558 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 SCLT1Q96NL6 688 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 ATP6V0A4Q9HBG4 840 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 CLDND1Q9NY35 253 aa18.35■□□□□ 0.53
NPM1-201ENST00000296930 TBKBP1A7MCY6 615 aa18.34■□□□□ 0.53
NPM1-201ENST00000296930 H3BQ06 376 aaPredicted RBP18.34■□□□□ 0.53
NPM1-201ENST00000296930 ZSCAN20P17040 1043 aaPredicted RBP18.34■□□□□ 0.53
NPM1-201ENST00000296930 FOSBP53539 338 aa18.34■□□□□ 0.53
NPM1-201ENST00000296930 PSMC5P62195 406 aa18.34■□□□□ 0.53
NPM1-201ENST00000296930 MTERF2Q49AM1 385 aa18.34■□□□□ 0.53
NPM1-201ENST00000296930 SPOUT1Q5T280 376 aaKnown RBP18.34■□□□□ 0.53
NPM1-201ENST00000296930 FOXD4L5Q5VV16 416 aaPredicted RBP18.34■□□□□ 0.53
NPM1-201ENST00000296930 SPPL3Q8TCT6 385 aa18.34■□□□□ 0.53
NPM1-201ENST00000296930 FOXD4L4Q8WXT5 416 aaPredicted RBP18.34■□□□□ 0.53
NPM1-201ENST00000296930 PPP2R3CQ969Q6 453 aa18.34■□□□□ 0.53
NPM1-201ENST00000296930 KCNMB3Q9NPA1 279 aa18.34■□□□□ 0.53
NPM1-201ENST00000296930 AAASQ9NRG9 546 aa18.34■□□□□ 0.53
NPM1-201ENST00000296930 GJB4Q9NTQ9 266 aa18.34■□□□□ 0.53
NPM1-201ENST00000296930 PCDHB12Q9Y5F1 795 aa18.34■□□□□ 0.53
NPM1-201ENST00000296930 PLXNA4Q9HCM2 1894 aa18.34■□□□□ 0.53
NPM1-201ENST00000296930 GRXCR2A6NFK2 248 aa18.33■□□□□ 0.53
NPM1-201ENST00000296930 STBD1O95210 358 aa18.33■□□□□ 0.53
NPM1-201ENST00000296930 DARSP14868 501 aaKnown RBP18.33■□□□□ 0.53
NPM1-201ENST00000296930 DNM2P50570 870 aa18.33■□□□□ 0.53
NPM1-201ENST00000296930 PPP2R5CQ13362 524 aa18.33■□□□□ 0.53
NPM1-201ENST00000296930 CAMK1Q14012 370 aa18.33■□□□□ 0.53
NPM1-201ENST00000296930 FAM102BQ5T8I3 360 aa18.33■□□□□ 0.53
NPM1-201ENST00000296930 PIK3AP1Q6ZUJ8 805 aa18.33■□□□□ 0.53
NPM1-201ENST00000296930 FAM50BQ9Y247 325 aa18.33■□□□□ 0.53
NPM1-201ENST00000296930 DDX11L8A8MPP1 907 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 TBX3O15119 743 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 HOXA2O43364 376 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 CCNT1O60563 726 aaKnown RBP18.32■□□□□ 0.52
NPM1-201ENST00000296930 DKC1O60832 514 aaKnown RBP eCLIP18.32■□□□□ 0.52
NPM1-201ENST00000296930 HYAL1Q12794 435 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 CTC1Q2NKJ3 1217 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 FAM178BQ8IXR5 827 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 FBXO18Q8NFZ0 1043 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 OXER1Q8TDS5 423 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 NLRP7Q8WX94 980 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 C8orf76Q96K31 380 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 CEP89Q96ST8 783 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 C1QTNF1Q9BXJ1 281 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 VAV3Q9UKW4 847 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 IGKV6-21A0A0C4DH24 114 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 H3BQV1 296 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 F13A1P00488 732 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 IL9P15248 144 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 DNAJB1P25685 340 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 GUCY1B3Q02153 619 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 CSPP1Q1MSJ5 1256 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 POF1BQ8WVV4 589 aa18.32■□□□□ 0.52
NPM1-201ENST00000296930 ZNF668Q96K58 619 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms