RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 CCT8L1PA6NM43 557 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 MEIS1O00470 390 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 LCA5LO95447 670 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 DRD4P21917 467 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 FLT3P36888 993 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.24
CAGE1-201ENST00000296742 FAM83BQ5T0W9 1011 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 PARD3BQ8TEW8 1205 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 ZBTB10Q96DT7 871 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 C7orf25Q9BPX7 421 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 ISCUQ9H1K1 167 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 NEUROG2Q9H2A3 272 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 NDST4Q9H3R1 872 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 EBF2Q9HAK2 575 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 TMOD2Q9NZR1 351 aa13.56□□□□□ -0.24
CAGE1-201ENST00000296742 TNS1Q9HBL0 1735 aaKnown RBP13.55□□□□□ -0.24
CAGE1-201ENST00000296742 PJA2O43164 708 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 CLSTN1O94985 981 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 EGFRP00533 1210 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 DGKZQ13574 1117 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 SYDE2Q5VT97 1194 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 CAPRIN2Q6IMN6 1127 aaKnown RBP13.55□□□□□ -0.24
CAGE1-201ENST00000296742 FBXO11Q86XK2 927 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 ANKS4BQ8N8V4 417 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 DCAF4Q8WV16 495 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 SAAL1Q96ER3 474 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 CHMP6Q96FZ7 201 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 INPP4AQ96PE3 977 aaPredicted RBP13.55□□□□□ -0.24
CAGE1-201ENST00000296742 FGFBP2Q9BYJ0 223 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 SEMA6BQ9H3T3 888 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 ZHX3Q9H4I2 956 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 BATF3Q9NR55 127 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 EIF4E1BA6NMX2 242 aaKnown RBP13.55□□□□□ -0.24
CAGE1-201ENST00000296742 KCNK3O14649 394 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 GHRP10912 638 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 KLRC1P26715 233 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 ECHS1P30084 290 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 FKBP1AP62942 108 aaKnown RBP13.55□□□□□ -0.24
CAGE1-201ENST00000296742 VWA3BQ502W6 1294 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 RNF10Q8N5U6 811 aaKnown RBP13.55□□□□□ -0.24
CAGE1-201ENST00000296742 USP38Q8NB14 1042 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 AGAP11Q8TF27 550 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 P3H4Q92791 437 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 AMNQ9BXJ7 453 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 AP1M1Q9BXS5 423 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 FBXO28Q9NVF7 368 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 SIK3Q9Y2K2 1263 aa13.55□□□□□ -0.24
CAGE1-201ENST00000296742 FAM86B1E9PN63 330 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 DIAPH2O60879 1101 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 CFBP00751 764 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 FAM86B2P0C5J1 330 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 ARHGAP4P98171 946 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 AMPD3Q01432 767 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 ARID5AQ03989 594 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 RAD54LQ92698 747 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 TAF4BQ92750 862 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 CCDC47Q96A33 483 aaKnown RBP13.54□□□□□ -0.24
CAGE1-201ENST00000296742 RAB34Q9BZG1 259 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 GOLPH3Q9H4A6 298 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 LRRC4CQ9HCJ2 640 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 PANK4Q9NVE7 773 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 PRR12Q9ULL5 1215 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 GRID2IPA4D2P6 1211 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 POTEFA5A3E0 1075 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 ENTPD3O75355 529 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 POTEIP0CG38 1075 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 CYP4A11Q02928 519 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 POTEGQ6S5H5 508 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 POTEEQ6S8J3 1075 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 SUPT20HQ8NEM7 779 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 SH3GL3Q99963 347 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.54□□□□□ -0.24
CAGE1-201ENST00000296742 YIPF3Q9GZM5 350 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 PAEPP09466 180 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 PSMC6P62333 389 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 PPP1R18Q6NYC8 613 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 TAX1BP1Q86VP1 789 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 XPO6Q96QU8 1125 aaKnown RBP13.54□□□□□ -0.24
CAGE1-201ENST00000296742 PSMD1Q99460 953 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 SELENOSQ9BQE4 189 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 DDX47Q9H0S4 455 aaKnown RBP13.54□□□□□ -0.24
CAGE1-201ENST00000296742 CUEDC2Q9H467 287 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 BCAS3Q9H6U6 928 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 GGT7Q9UJ14 662 aa13.54□□□□□ -0.24
CAGE1-201ENST00000296742 SPDYE3A6NKU9 549 aa13.53□□□□□ -0.24
CAGE1-201ENST00000296742 CEP104O60308 925 aa13.53□□□□□ -0.24
CAGE1-201ENST00000296742 CUL1Q13616 776 aa13.53□□□□□ -0.24
CAGE1-201ENST00000296742 PDIA5Q14554 519 aa13.53□□□□□ -0.24
CAGE1-201ENST00000296742 NELFCDQ8IXH7 590 aa13.53□□□□□ -0.24
CAGE1-201ENST00000296742 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
CAGE1-201ENST00000296742 ZNF570Q96NI8 536 aa13.53□□□□□ -0.24
CAGE1-201ENST00000296742 NOP53Q9NZM5 478 aaKnown RBP13.53□□□□□ -0.24
CAGE1-201ENST00000296742 PNMA2Q9UL42 364 aa13.53□□□□□ -0.24
CAGE1-201ENST00000296742 GREB1LQ9C091 1923 aaPredicted RBP13.53□□□□□ -0.24
CAGE1-201ENST00000296742 DAPK3O43293 454 aa13.53□□□□□ -0.24
CAGE1-201ENST00000296742 MED24O75448 989 aa13.53□□□□□ -0.24
CAGE1-201ENST00000296742 AP1G2O75843 785 aa13.53□□□□□ -0.24
CAGE1-201ENST00000296742 VIL1P09327 827 aaKnown RBP13.53□□□□□ -0.24
CAGE1-201ENST00000296742 CXCL9Q07325 125 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms