RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 TAF1BQ53T94 588 aaPredicted RBP11.78□□□□□ -0.52
PBRM1-201ENST00000296302 EPHA10Q5JZY3 1008 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 RAD9BQ6WBX8 426 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 GIPC2Q8TF65 315 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 KRT82Q9NSB4 513 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 USP17L3A6NCW0 530 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 USP17L4A6NCW7 530 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 ZNF185O15231 689 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 HNRNPH1P31943 449 aaKnown RBP11.78□□□□□ -0.52
PBRM1-201ENST00000296302 FMR1Q06787 632 aaKnown RBP eCLIP11.78□□□□□ -0.52
PBRM1-201ENST00000296302 TXNRD1Q16881 649 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 NAALADL2Q58DX5 795 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 USP17L1Q7RTZ2 530 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 MMGT1Q8N4V1 131 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 FAM149B1Q96BN6 582 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 DYNLL2Q96FJ2 89 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 SYNJ2BP-COX16A0A087WUM0 186 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 CFAP69A5D8W1 941 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 TCP11X1B4DZS4 312 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 OATP04181 439 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 PSMA2P25787 234 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 PLA2G4AP47712 749 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 OR6B2Q6IFH4 312 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 TRMT10CQ7L0Y3 403 aaKnown RBP11.78□□□□□ -0.52
PBRM1-201ENST00000296302 EXOC8Q8IYI6 725 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 ATP11CQ8NB49 1132 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 CDHR1Q96JP9 859 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 HEMGNQ9BXL5 484 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 COX16Q9P0S2 106 aa11.78□□□□□ -0.52
PBRM1-201ENST00000296302 WDR64B1ANS9 1081 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 CHN1P15882 459 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 SERPINB4P48594 390 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 FXR1P51114 621 aaKnown RBP eCLIP11.77□□□□□ -0.52
PBRM1-201ENST00000296302 SYDE2Q5VT97 1194 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 KLC3Q6P597 504 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 CYFIP2Q96F07 1278 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 RNPC3Q96LT9 517 aaKnown RBP11.77□□□□□ -0.52
PBRM1-201ENST00000296302 POTEMA6NI47 508 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 EPHB1P54762 984 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 UBXN2AP68543 259 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 OCRLQ01968 901 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 DRAP1Q14919 205 aaPredicted RBP11.77□□□□□ -0.52
PBRM1-201ENST00000296302 KIAA1755Q5JYT7 1200 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 PPP1R18Q6NYC8 613 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 SYDE1Q6ZW31 735 aaPredicted RBP11.77□□□□□ -0.52
PBRM1-201ENST00000296302 BBS5Q8N3I7 341 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 ENAHQ8N8S7 591 aaPredicted RBP11.77□□□□□ -0.52
PBRM1-201ENST00000296302 XXYLT1Q8NBI6 393 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 CATSPER1Q8NEC5 780 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 RIN2Q8WYP3 895 aaPredicted RBP11.77□□□□□ -0.52
PBRM1-201ENST00000296302 ATP6V1E2Q96A05 226 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 PRMT1Q99873 361 aaKnown RBP11.77□□□□□ -0.52
PBRM1-201ENST00000296302 NUP85Q9BW27 656 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 TRPC5Q9UL62 973 aaPredicted RBP11.77□□□□□ -0.52
PBRM1-201ENST00000296302 SMG5Q9UPR3 1016 aaKnown RBP11.77□□□□□ -0.52
PBRM1-201ENST00000296302 FIS1Q9Y3D6 152 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 ANGPTL3Q9Y5C1 460 aa11.77□□□□□ -0.52
PBRM1-201ENST00000296302 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 LPXNO60711 386 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 TFAMQ00059 246 aaKnown RBP11.77□□□□□ -0.53
PBRM1-201ENST00000296302 MECOMQ03112 1051 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 SLC18A3Q16572 532 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 NBPF20Q3BBV1 942 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 SLFN12LQ6IEE8 588 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 C3orf20Q8ND61 904 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 WWP1Q9H0M0 922 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.77□□□□□ -0.53
PBRM1-201ENST00000296302 ZBTB1Q9Y2K1 713 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 METP08581 1390 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 TRPM8Q7Z2W7 1104 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 TMEM35BQ8NCS4 154 aa11.77□□□□□ -0.53
PBRM1-201ENST00000296302 CHEK2O96017 543 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 FTLP02792 175 aaPredicted RBP11.76□□□□□ -0.53
PBRM1-201ENST00000296302 CALB1P05937 261 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 MYBL1P10243 752 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 TAC1P20366 129 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 CDK8P49336 464 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 CTTNQ14247 550 aaKnown RBP11.76□□□□□ -0.53
PBRM1-201ENST00000296302 RARS2Q5T160 578 aaKnown RBP11.76□□□□□ -0.53
PBRM1-201ENST00000296302 MIS18BP1Q6P0N0 1132 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 KIAA0825Q8IV33 1275 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 ELOA2Q8IYF1 753 aaPredicted RBP11.76□□□□□ -0.53
PBRM1-201ENST00000296302 ADSSL1Q8N142 457 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 BTBD6Q96KE9 485 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 FUT8Q9BYC5 575 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 GJA3Q9Y6H8 435 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 CFAP74Q9C0B2 1584 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 NOP14P78316 857 aaKnown RBP11.76□□□□□ -0.53
PBRM1-201ENST00000296302 USPL1Q5W0Q7 1092 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 DHX38Q92620 1227 aaKnown RBP11.76□□□□□ -0.53
PBRM1-201ENST00000296302 DHX36Q9H2U1 1008 aaKnown RBP11.76□□□□□ -0.53
PBRM1-201ENST00000296302 ZWILCHQ9H900 591 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 SLC40A1Q9NP59 571 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 SEL1LQ9UBV2 794 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 TRAF3IP3Q9Y228 551 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 FHOD1Q9Y613 1164 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 SLC4A7Q9Y6M7 1214 aa11.76□□□□□ -0.53
PBRM1-201ENST00000296302 TRPM1Q7Z4N2 1603 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms