RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 CCDC60Q8IWA6 550 aaPredicted RBP11.95□□□□□ -0.5
RFC4-201ENST00000296273 ABI1Q8IZP0 508 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 LRRC43Q8N309 656 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 CASP10Q92851 521 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 RIPOR3Q96MK2 946 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 NECTIN4Q96NY8 510 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 OSMRQ99650 979 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 CDHR5Q9HBB8 845 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 LOXHD1Q8IVV2 1947 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 CNTNAP5Q8WYK1 1306 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 SMCO2A6NFE2 343 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 DDX39AO00148 427 aaKnown RBP11.94□□□□□ -0.5
RFC4-201ENST00000296273 SLC27A2O14975 620 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 MAGEB2O15479 319 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 GPR32O75388 356 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 CCNE2O96020 404 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 FGFR1P11362 822 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 CLK2P49760 499 aaKnown RBP11.94□□□□□ -0.5
RFC4-201ENST00000296273 VCPP55072 806 aaKnown RBP11.94□□□□□ -0.5
RFC4-201ENST00000296273 RBM10P98175 930 aaKnown RBP11.94□□□□□ -0.5
RFC4-201ENST00000296273 ITIH3Q06033 890 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 DSC3Q14574 896 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 BMS1Q14692 1282 aaKnown RBP11.94□□□□□ -0.5
RFC4-201ENST00000296273 KIZQ2M2Z5 673 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 L1TD1Q5T7N2 865 aaKnown RBP11.94□□□□□ -0.5
RFC4-201ENST00000296273 MCTP2Q6DN12 878 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 CES5AQ6NT32 575 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 SWSAP1Q6NVH7 229 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 SYCE2Q6PIF2 218 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 BLOC1S2Q6QNY1 142 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 KCNT2Q6UVM3 1135 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 PLA2G4DQ86XP0 818 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 CKAP2LQ8IYA6 745 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 SMAP1Q8IYB5 467 aaPredicted RBP11.94□□□□□ -0.5
RFC4-201ENST00000296273 UBALD2Q8IYN6 164 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 ATOH1Q92858 354 aaPredicted RBP11.94□□□□□ -0.5
RFC4-201ENST00000296273 PGBD1Q96JS3 809 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 JAKMIP1Q96N16 626 aaKnown RBP11.94□□□□□ -0.5
RFC4-201ENST00000296273 ZNF558Q96NG5 402 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 CASD1Q96PB1 797 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 TBC1D22BQ9NU19 505 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 BARHL2Q9NY43 387 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 TCEAL9Q9UHQ7 104 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 SORCS3Q9UPU3 1222 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 ATP6V1DQ9Y5K8 247 aa11.94□□□□□ -0.5
RFC4-201ENST00000296273 MAFBQ9Y5Q3 323 aaPredicted RBP11.94□□□□□ -0.5
RFC4-201ENST00000296273 TRIOO75962 3097 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 CARNS1A5YM72 827 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 ZBTB42B2RXF5 422 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 IPO5O00410 1097 aaKnown RBP11.93□□□□□ -0.5
RFC4-201ENST00000296273 BAG4O95429 457 aaKnown RBP11.93□□□□□ -0.5
RFC4-201ENST00000296273 C22orf31O95567 290 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 CYP3A4P08684 503 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 TMOD1P28289 359 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 SETQ01105 290 aaPredicted RBP11.93□□□□□ -0.5
RFC4-201ENST00000296273 MTMR3Q13615 1198 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 SMC1AQ14683 1233 aaKnown RBP11.93□□□□□ -0.5
RFC4-201ENST00000296273 TYW1BQ6NUM6 668 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 ZNF746Q6NUN9 644 aaPredicted RBP11.93□□□□□ -0.5
RFC4-201ENST00000296273 APOA5Q6Q788 366 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 TMC7Q7Z402 723 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 RAB11FIP4Q86YS3 637 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 METTL13Q8N6R0 699 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 RSPH1Q8WYR4 309 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 FAM167AQ96KS9 214 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 MAP7D2Q96T17 732 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 SPG21Q9NZD8 308 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 HCSTQ9UBK5 93 aa11.93□□□□□ -0.5
RFC4-201ENST00000296273 HIDE1A8MVS5 230 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 PROB1E7EW31 1015 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 FAM86B1E9PN63 330 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 DHX15O43143 795 aaKnown RBP11.92□□□□□ -0.5
RFC4-201ENST00000296273 VTNP04004 478 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 FAM86B2P0C5J1 330 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 ATP4AP20648 1035 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 PDCP20941 246 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 AK2P54819 239 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 FOXK2Q01167 660 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 APOBRQ0VD83 1088 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 RTN1Q16799 776 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 LLGL2Q6P1M3 1020 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 ZNF577Q9BSK1 485 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 LRRC2Q9BYS8 371 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 ADAM7Q9H2U9 754 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 FAM86C1Q9NVL1 165 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 PCDHA10Q9Y5I2 948 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 HCFC2Q9Y5Z7 792 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 V9GY48 417 aaPredicted RBP11.92□□□□□ -0.5
RFC4-201ENST00000296273 IGLV3-22A0A075B6J6 115 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 ZBTB43O43298 467 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
RFC4-201ENST00000296273 BRD1O95696 1058 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 EOMESO95936 686 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 PSAPP07602 524 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 RPS6KB1P23443 525 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 EIF4BP23588 611 aaKnown RBP11.92□□□□□ -0.5
RFC4-201ENST00000296273 MTHFRP42898 656 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 RCAN1P53805 252 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 NLRP11P59045 1033 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms