RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SLC38A10Q9HBR0 1119 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 PLCB1Q9NQ66 1216 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 USP20Q9Y2K6 914 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 BACH1O14867 736 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
RHO-201ENST00000296271 NOP2P46087 812 aaKnown RBP12.86□□□□□ -0.35
RHO-201ENST00000296271 MTMR1Q13613 665 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 PLEKHO2Q8TD55 490 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 U2AF1L4Q8WU68 220 aaKnown RBP12.86□□□□□ -0.35
RHO-201ENST00000296271 KAT5Q92993 513 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 GPR88Q9GZN0 384 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 GBP3Q9H0R5 595 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 TAS2R14Q9NYV8 317 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 IGSF9BQ9UPX0 1349 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 SLC16A4O15374 487 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 EVI5O60447 810 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 EXOC3O60645 756 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 RARRES1P49788 294 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 DRAP1Q14919 205 aaPredicted RBP12.85□□□□□ -0.35
RHO-201ENST00000296271 PGM5Q15124 567 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 PHLDB3Q6NSJ2 640 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 OSGEPQ9NPF4 335 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 DNAJC12Q9UKB3 198 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 EIF3DO15371 548 aaKnown RBP eCLIP12.85□□□□□ -0.35
RHO-201ENST00000296271 PLA2G6O60733 806 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 PPP1R37O75864 691 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 SYF2O95926 243 aaKnown RBP12.85□□□□□ -0.35
RHO-201ENST00000296271 GLI1P08151 1106 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 ABCB4P21439 1286 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 CYP2C19P33261 490 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 PPP3CAQ08209 521 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 MEI1Q5TIA1 1274 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 TRERF1Q96PN7 1200 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 RMDN3Q96TC7 470 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
RHO-201ENST00000296271 DMAC2Q9NW81 257 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 HPCAL4Q9UM19 191 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 UBIAD1Q9Y5Z9 338 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 DOCK5Q9H7D0 1870 aa12.85□□□□□ -0.35
RHO-201ENST00000296271 SLC16A3O15427 465 aaKnown RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 TCP1P17987 556 aaKnown RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 GCLMP48507 274 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 SETQ01105 290 aaPredicted RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 BAATQ14032 418 aaPredicted RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 DALRD3Q5D0E6 543 aaKnown RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 MMGT1Q8N4V1 131 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 RIT2Q99578 217 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 STRA6Q9BX79 667 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 METTL14Q9HCE5 456 aaKnown RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 PCDHGC5Q9Y5F6 944 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 F8VZ95 297 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 AGPSO00116 658 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 KCNK3O14649 394 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 WDR46O15213 610 aaKnown RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 CALCAP01258 141 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 HOXA7P31268 230 aaPredicted RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 YWHABP31946 246 aaKnown RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 HMGCS2P54868 508 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 PEX3P56589 373 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 SND1Q7KZF4 910 aaKnown RBP eCLIP12.84□□□□□ -0.35
RHO-201ENST00000296271 HS2ST1Q7LGA3 356 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 ARHGEF19Q8IW93 802 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 TSEN2Q8NCE0 465 aaKnown RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 SLC20A1Q8WUM9 679 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 KRT12Q99456 494 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 POP1Q99575 1024 aaKnown RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 KIAA1683Q9H0B3 1180 aa12.84□□□□□ -0.35
RHO-201ENST00000296271 INTS2Q9H0H0 1204 aaKnown RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 CNOT7Q9UIV1 285 aaKnown RBP12.84□□□□□ -0.35
RHO-201ENST00000296271 P4HBP07237 508 aaKnown RBP12.83□□□□□ -0.35
RHO-201ENST00000296271 FAM153BP0C7A2 387 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 GUCY2CP25092 1073 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 GGCXP38435 758 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 LMAN1P49257 510 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 CARSP49589 748 aaKnown RBP12.83□□□□□ -0.35
RHO-201ENST00000296271 FAM153CQ494X1 144 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 C1orf220Q5T0J3 134 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 KLHL7Q8IXQ5 586 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 RNF10Q8N5U6 811 aaKnown RBP12.83□□□□□ -0.35
RHO-201ENST00000296271 SAAL1Q96ER3 474 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 PDCD2LQ9BRP1 358 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 AP1M1Q9BXS5 423 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 EHMT1Q9H9B1 1298 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 FAM153AQ9UHL3 310 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 PPP1R9AQ9ULJ8 1098 aa12.83□□□□□ -0.35
RHO-201ENST00000296271 EMSYQ7Z589 1322 aa12.83□□□□□ -0.36
RHO-201ENST00000296271 ANKRD63C9JTQ0 380 aa12.83□□□□□ -0.36
RHO-201ENST00000296271 FOXN3O00409 490 aaPredicted RBP12.83□□□□□ -0.36
RHO-201ENST00000296271 VWA5AO00534 786 aa12.83□□□□□ -0.36
RHO-201ENST00000296271 PRLRP16471 622 aa12.83□□□□□ -0.36
RHO-201ENST00000296271 BAG6P46379 1132 aa12.83□□□□□ -0.36
RHO-201ENST00000296271 FSTL1Q12841 308 aa12.83□□□□□ -0.36
RHO-201ENST00000296271 PCNX4Q63HM2 1172 aa12.83□□□□□ -0.36
RHO-201ENST00000296271 RNF207Q6ZRF8 634 aa12.83□□□□□ -0.36
RHO-201ENST00000296271 ARHGEF26Q96DR7 871 aa12.83□□□□□ -0.36
RHO-201ENST00000296271 INPP4AQ96PE3 977 aaPredicted RBP12.83□□□□□ -0.36
RHO-201ENST00000296271 SEPT11Q9NVA2 429 aaKnown RBP12.83□□□□□ -0.36
RHO-201ENST00000296271 FRMD4BQ9Y2L6 1034 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms