RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 SMC6Q96SB8 1091 aa12.51□□□□□ -0.41
TGFA-201ENST00000295400 C11orf70Q9BRQ4 267 aa12.51□□□□□ -0.41
TGFA-201ENST00000295400 JCADQ9P266 1359 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 SYNJ2BP-COX16A0A087WUM0 186 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 CUL1Q13616 776 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 XXYLT1Q8NBI6 393 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 DCAF4Q8WV16 495 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 COX16Q9P0S2 106 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 TRPC5Q9UL62 973 aaPredicted RBP12.5□□□□□ -0.41
TGFA-201ENST00000295400 TTLL3Q9Y4R7 772 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 LRRD1A4D1F6 860 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 PHF20L1A8MW92 1017 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 CCDC188H7C350 402 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 ADAMTS3O15072 1205 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 ZRANB2O95218 330 aaKnown RBP eCLIP12.5□□□□□ -0.41
TGFA-201ENST00000295400 CYP11B2P19099 503 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 SH3RF1Q7Z6J0 888 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 NLRP14Q86W24 1093 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 MCF2L2Q86YR7 1114 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 MSANTD4Q8NCY6 345 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.5□□□□□ -0.41
TGFA-201ENST00000295400 ANKS1AQ92625 1134 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 RMDN3Q96TC7 470 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 LBHD1Q9BQE6 289 aaPredicted RBP12.5□□□□□ -0.41
TGFA-201ENST00000295400 HSD3B7Q9H2F3 369 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 VIRMAQ69YN4 1812 aaKnown RBP12.5□□□□□ -0.41
TGFA-201ENST00000295400 SRGAP2CP0DJJ0 459 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 HSPA1LP34931 641 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 MTMR1Q13613 665 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 LRRC31Q6UY01 552 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 NCAPG2Q86XI2 1143 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 MCUR1Q96AQ8 359 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 TMEM206Q9H813 350 aa12.5□□□□□ -0.41
TGFA-201ENST00000295400 SSU72P8A0A1W2PR75 194 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 INO80B-WBP1J3KQ70 363 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 USP11P51784 963 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 VAMP7P51809 220 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 SMAD1Q15797 465 aaKnown RBP12.49□□□□□ -0.41
TGFA-201ENST00000295400 VPS52Q8N1B4 723 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 SUPT20HQ8NEM7 779 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 HNRNPLLQ8WVV9 542 aaKnown RBP12.49□□□□□ -0.41
TGFA-201ENST00000295400 MTRQ99707 1265 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 INO80BQ9C086 356 aaPredicted RBP12.49□□□□□ -0.41
TGFA-201ENST00000295400 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
TGFA-201ENST00000295400 KLHL11Q9NVR0 708 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 CLEC11AQ9Y240 323 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 GLI1P08151 1106 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 TMEM191BP0C7N4 346 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 FYB2Q5VWT5 728 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 APBB1IPQ7Z5R6 666 aaPredicted RBP12.49□□□□□ -0.41
TGFA-201ENST00000295400 TMEM139Q8IV31 216 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 SRRM1Q8IYB3 904 aaKnown RBP12.49□□□□□ -0.41
TGFA-201ENST00000295400 MDM1Q8TC05 714 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 KLHL29Q96CT2 875 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 NUP85Q9BW27 656 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 LCMT1Q9UIC8 334 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 MAGED2Q9UNF1 606 aaPredicted RBP12.49□□□□□ -0.41
TGFA-201ENST00000295400 DENND3A2RUS2 1198 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 DKC1O60832 514 aaKnown RBP eCLIP12.49□□□□□ -0.41
TGFA-201ENST00000295400 SOX5P35711 763 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 RWDD2BP57060 319 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 GPC5P78333 572 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 GNPTABQ3T906 1256 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 ANKRD20A3Q5VUR7 823 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 CENPPQ6IPU0 288 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 PODNQ7Z5L7 613 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 SLC51AQ86UW1 340 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 MASTLQ96GX5 879 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 RUSC1Q9BVN2 902 aa12.49□□□□□ -0.41
TGFA-201ENST00000295400 RTFDC1Q9BY42 306 aaPredicted RBP12.49□□□□□ -0.41
TGFA-201ENST00000295400 GMNCA6NCL1 334 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 SNCBQ16143 134 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 ZNF449Q6P9G9 518 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 PPP1R37O75864 691 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 YWHAGP61981 247 aaKnown RBP eCLIP12.48□□□□□ -0.41
TGFA-201ENST00000295400 CEP55Q53EZ4 464 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 CCDC137Q6PK04 289 aaKnown RBP12.48□□□□□ -0.41
TGFA-201ENST00000295400 RILPQ96NA2 401 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 PNMA5Q96PV4 448 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 CALN1Q9BXU9 219 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 PRR12Q9ULL5 1215 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 A0A1B0GUA9 196 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 ZBTB39O15060 712 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 ECE1P42892 770 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 SYCP2LQ5T4T6 812 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 LDHDQ86WU2 507 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 SLC7A3Q8WY07 619 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 STMN2Q93045 179 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 CCT8L2Q96SF2 557 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 KIFC3Q9BVG8 833 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 PNMA2Q9UL42 364 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 MAD1L1Q9Y6D9 718 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 PDXKO00764 312 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 KRT1P04264 644 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 MYBL2P10244 700 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
TGFA-201ENST00000295400 PMS2P54278 862 aa12.48□□□□□ -0.41
TGFA-201ENST00000295400 PPP2R2AP63151 447 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms