RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 PRR16Q569H4 304 aa13.08□□□□□ -0.32
CLPB-201ENST00000294053 FAM133AQ8N9E0 248 aa13.08□□□□□ -0.32
CLPB-201ENST00000294053 RETREG2Q8NC44 543 aa13.08□□□□□ -0.32
CLPB-201ENST00000294053 PRMT6Q96LA8 375 aaPredicted RBP13.08□□□□□ -0.32
CLPB-201ENST00000294053 MAGEF1Q9HAY2 307 aa13.08□□□□□ -0.32
CLPB-201ENST00000294053 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
CLPB-201ENST00000294053 CCT8L1PA6NM43 557 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 EVI5O60447 810 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 MED24O75448 989 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 GH2P01242 217 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 ITGA4P13612 1032 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 ECE1P42892 770 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 VWA3BQ502W6 1294 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 LRRC55Q6ZSA7 311 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 OTUD6AQ7L8S5 288 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 ZNF483Q8TF39 744 aaPredicted RBP13.07□□□□□ -0.32
CLPB-201ENST00000294053 FBXO41Q8TF61 875 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 PURBQ96QR8 312 aaKnown RBP13.07□□□□□ -0.32
CLPB-201ENST00000294053 ANO3Q9BYT9 981 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 TRPC6Q9Y210 931 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 GREB1LQ9C091 1923 aaPredicted RBP13.07□□□□□ -0.32
CLPB-201ENST00000294053 CLRN2A0PK11 232 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 TTI1O43156 1089 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 CHN1P15882 459 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 BZW1Q7L1Q6 419 aaKnown RBP13.07□□□□□ -0.32
CLPB-201ENST00000294053 PODNQ7Z5L7 613 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 CCDC25Q86WR0 208 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 SLC17A8Q8NDX2 589 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
CLPB-201ENST00000294053 IRAK4Q9NWZ3 460 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 STK17AQ9UEE5 414 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 TRAF5O00463 557 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 CAND2O75155 1236 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 NDUFB10O96000 172 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 CASP5P51878 434 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 CYP4A11Q02928 519 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 KLHL30Q0D2K2 578 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 DRP2Q13474 957 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 UAP1Q16222 522 aaPredicted RBP13.07□□□□□ -0.32
CLPB-201ENST00000294053 KIAA1755Q5JYT7 1200 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 PRMT1Q99873 361 aaKnown RBP13.07□□□□□ -0.32
CLPB-201ENST00000294053 TRIM51Q9BSJ1 452 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 PI4KBQ9UBF8 816 aa13.07□□□□□ -0.32
CLPB-201ENST00000294053 YDJCA8MPS7 323 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 FAM86B1E9PN63 330 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 hCG_1984214I3L0E3 225 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 FAM86B2P0C5J1 330 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 UBXN2AP68543 259 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 PDIA5Q14554 519 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 SFMBT2Q5VUG0 894 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 CCDC84Q86UT8 332 aaPredicted RBP13.06□□□□□ -0.32
CLPB-201ENST00000294053 LRRC34Q8IZ02 419 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 ZNF713Q8N859 430 aaPredicted RBP13.06□□□□□ -0.32
CLPB-201ENST00000294053 KLHL29Q96CT2 875 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 PSMD1Q99460 953 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 LSM14BQ9BX40 385 aaKnown RBP13.06□□□□□ -0.32
CLPB-201ENST00000294053 IKZF4Q9H2S9 585 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 LUC7LQ9NQ29 371 aaKnown RBP13.06□□□□□ -0.32
CLPB-201ENST00000294053 ABCF3Q9NUQ8 709 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 SIK3Q9Y2K2 1263 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 RGPD3A6NKT7 1758 aaPredicted RBP13.06□□□□□ -0.32
CLPB-201ENST00000294053 RGPD4Q7Z3J3 1758 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 TCP10L2B9ZVM9 353 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 ZYXQ15942 572 aaKnown RBP13.06□□□□□ -0.32
CLPB-201ENST00000294053 ANKRD42Q8N9B4 389 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 CCT6BQ92526 530 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 RAB34Q9BZG1 259 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 INTS9Q9NV88 658 aaKnown RBP13.06□□□□□ -0.32
CLPB-201ENST00000294053 TRIM33Q9UPN9 1127 aa13.06□□□□□ -0.32
CLPB-201ENST00000294053 A0A087X0T9 212 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 FAM228BP0C875 321 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 PCK1P35558 622 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 PLTPP55058 493 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 TATDN2Q93075 761 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 XPO6Q96QU8 1125 aaKnown RBP13.05□□□□□ -0.32
CLPB-201ENST00000294053 C15orf41Q9Y2V0 281 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 SMIM24O75264 130 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 SHBGP04278 402 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 PLA2G4BP0C869 781 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 PRLRP16471 622 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 POLD1P28340 1107 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 PABPC4Q13310 644 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLPB-201ENST00000294053 ABCB5Q2M3G0 1257 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 ARSHQ5FYA8 562 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 STRIP1Q5VSL9 837 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 GPBP1Q86WP2 473 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 GUF1Q8N442 669 aaKnown RBP13.05□□□□□ -0.32
CLPB-201ENST00000294053 USP38Q8NB14 1042 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 MTFR1LQ9H019 292 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 SEPT11Q9NVA2 429 aaKnown RBP13.05□□□□□ -0.32
CLPB-201ENST00000294053 NOP53Q9NZM5 478 aaKnown RBP13.05□□□□□ -0.32
CLPB-201ENST00000294053 SLC12A6Q9UHW9 1150 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 PVALEFA0A1B0GWK0 134 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 H0Y3Z8 333 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 RTN2O75298 545 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 ARHGAP4P98171 946 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 TAF11Q15544 211 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 ACER1Q8TDN7 264 aa13.05□□□□□ -0.32
CLPB-201ENST00000294053 ERGIC2Q96RQ1 377 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms