RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 FOSL2P15408 326 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 ANKRD44Q8N8A2 993 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 COG1Q8WTW3 980 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 ACAP3Q96P50 834 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.25□□□□□ -0.29
SLX4-201ENST00000294008 MAP3K5Q99683 1374 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 CD109Q6YHK3 1445 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 SFI1A8K8P3 1242 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 PSMA3P25788 255 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 MZF1P28698 734 aaPredicted RBP13.25□□□□□ -0.29
SLX4-201ENST00000294008 C2orf54Q08AI8 447 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 FASTKD1Q53R41 847 aaKnown RBP13.25□□□□□ -0.29
SLX4-201ENST00000294008 SGO1Q5FBB7 561 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 KRT39Q6A163 491 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 FAM133AQ8N9E0 248 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 DIS3LQ8TF46 1054 aaKnown RBP13.25□□□□□ -0.29
SLX4-201ENST00000294008 LARP4BQ92615 738 aaKnown RBP13.25□□□□□ -0.29
SLX4-201ENST00000294008 KLHL25Q9H0H3 589 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 CFTRP13569 1480 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 COPB2P35606 906 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 CCT5P48643 541 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 FOXR1Q6PIV2 292 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 OR8K1Q8NGG5 319 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 AGBL1Q96MI9 1066 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 SLC25A13Q9UJS0 675 aa13.25□□□□□ -0.29
SLX4-201ENST00000294008 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 PEX1O43933 1283 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 ACSL3O95573 720 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 RHPN2Q8IUC4 686 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 MRPL50Q8N5N7 158 aaKnown RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 TRIM11Q96F44 468 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 GCNT4Q9P109 453 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 FAM32AQ9Y421 112 aaKnown RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 DAPK1P53355 1430 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 ZFXP17010 805 aaPredicted RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 HMOX2P30519 316 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 DHX9Q08211 1270 aaKnown RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 LLPHQ9BRT6 129 aaKnown RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 ACTR5Q9H9F9 607 aaPredicted RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 PALD1Q9ULE6 856 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 NBPF26B4DH59 902 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 TFRCP02786 760 aaKnown RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 YWHAZP63104 245 aaKnown RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 MRPL47Q9HD33 250 aaKnown RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 SPAG7O75391 227 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 GRK2P25098 689 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 CHMLP26374 656 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 SYCP2LQ5T4T6 812 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 LUZP2Q86TE4 346 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 GAS2L3Q86XJ1 694 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 CNOT6LQ96LI5 555 aaKnown RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 CYP4F11Q9HBI6 524 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 ADGRA2Q96PE1 1338 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 ENAHQ8N8S7 591 aaPredicted RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 FLAD1Q8NFF5 587 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 PNKPQ96T60 521 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 METTL22Q9BUU2 404 aaPredicted RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 PAIP2BQ9ULR5 123 aaKnown RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 K7ERI5 159 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 ASAP2O43150 1006 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 FTCDO95954 541 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 CTSHP09668 335 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 RALAP11233 206 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 ARHGEF7Q14155 803 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 USP39Q53GS9 565 aaKnown RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 ZC3H18Q86VM9 953 aaKnown RBP13.24□□□□□ -0.29
SLX4-201ENST00000294008 MAGEB5Q9BZ81 275 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 YY1AP1Q9H869 796 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 MAD2L2Q9UI95 211 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 MID2Q9UJV3 735 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 PRR12Q9ULL5 1215 aa13.24□□□□□ -0.29
SLX4-201ENST00000294008 IYDQ6PHW0 289 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 PPP1R13BQ96KQ4 1090 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 SEPT5Q99719 369 aaPredicted RBP13.23□□□□□ -0.29
SLX4-201ENST00000294008 TSSK1BQ9BXA7 367 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 ABCC5O15440 1437 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 ZC3H15Q8WU90 426 aaKnown RBP13.23□□□□□ -0.29
SLX4-201ENST00000294008 CLIC6Q96NY7 704 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 AMNQ9BXJ7 453 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 MFSD1Q9H3U5 465 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 RNF181Q9P0P0 153 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 ABCC4O15439 1325 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 A0A087X0T9 212 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 DAB1O75553 588 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 MLNP12872 115 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 MAP3K10Q02779 954 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 USPL1Q5W0Q7 1092 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 ZNF790Q6PG37 636 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 BTBD6Q96KE9 485 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 AP1M1Q9BXS5 423 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 IPO5O00410 1097 aaKnown RBP13.23□□□□□ -0.29
SLX4-201ENST00000294008 ATP9BO43861 1147 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 KDM1AO60341 852 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 TADA3O75528 432 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 TRIP4Q15650 581 aaPredicted RBP13.23□□□□□ -0.29
SLX4-201ENST00000294008 UBE2SQ16763 222 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 RIN3Q8TB24 985 aa13.23□□□□□ -0.29
SLX4-201ENST00000294008 EPB41L5Q9HCM4 733 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms