RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 KIF22Q14807 665 aa18.46■□□□□ 0.55
CPSF4-201ENST00000292476 FAM110CQ1W6H9 321 aa18.46■□□□□ 0.55
CPSF4-201ENST00000292476 MIS18BP1Q6P0N0 1132 aa18.46■□□□□ 0.55
CPSF4-201ENST00000292476 CC2D1AQ6P1N0 951 aaPredicted RBP18.46■□□□□ 0.55
CPSF4-201ENST00000292476 CCDC170Q8IYT3 715 aa18.46■□□□□ 0.55
CPSF4-201ENST00000292476 SLC35F6Q8N357 371 aa18.46■□□□□ 0.55
CPSF4-201ENST00000292476 KIAA0895Q8NCT3 520 aa18.46■□□□□ 0.55
CPSF4-201ENST00000292476 EFCC1Q9HA90 598 aa18.46■□□□□ 0.55
CPSF4-201ENST00000292476 ARFGAP3Q9NP61 516 aa18.46■□□□□ 0.55
CPSF4-201ENST00000292476 RNF225M0QZC1 329 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-201ENST00000292476 GUCY2CP25092 1073 aa18.45■□□□□ 0.54
CPSF4-201ENST00000292476 MAPK4P31152 587 aa18.45■□□□□ 0.54
CPSF4-201ENST00000292476 ZBED6P86452 979 aa18.45■□□□□ 0.54
CPSF4-201ENST00000292476 CENPPQ6IPU0 288 aa18.45■□□□□ 0.54
CPSF4-201ENST00000292476 STXBP4Q6ZWJ1 553 aa18.45■□□□□ 0.54
CPSF4-201ENST00000292476 C1orf186Q6ZWK4 172 aa18.45■□□□□ 0.54
CPSF4-201ENST00000292476 MSANTD4Q8NCY6 345 aa18.45■□□□□ 0.54
CPSF4-201ENST00000292476 MORC4Q8TE76 937 aa18.45■□□□□ 0.54
CPSF4-201ENST00000292476 HNRNPLLQ8WVV9 542 aaKnown RBP18.45■□□□□ 0.54
CPSF4-201ENST00000292476 REEP2Q9BRK0 252 aa18.45■□□□□ 0.54
CPSF4-201ENST00000292476 IRX2Q9BZI1 471 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-201ENST00000292476 CYLC1P35663 651 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-201ENST00000292476 TERF2Q15554 542 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 SEPT14Q6ZU15 432 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 MSL3Q8N5Y2 521 aaKnown RBP18.44■□□□□ 0.54
CPSF4-201ENST00000292476 CNOT6LQ96LI5 555 aaKnown RBP18.44■□□□□ 0.54
CPSF4-201ENST00000292476 PARD6BQ9BYG5 372 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 ZHX3Q9H4I2 956 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 OLFML3Q9NRN5 406 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 ZNHIT6Q9NWK9 470 aaKnown RBP18.44■□□□□ 0.54
CPSF4-201ENST00000292476 SLC5A4Q9NY91 659 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 RAB21Q9UL25 225 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 MGAMO43451 1857 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 ASTN1O14525 1302 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 FAM13AO94988 1023 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 CCNE2O96020 404 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 YWHABP31946 246 aaKnown RBP18.44■□□□□ 0.54
CPSF4-201ENST00000292476 PSMC4P43686 418 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 ANKRD40Q6AI12 368 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 ZNF467Q7Z7K2 595 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-201ENST00000292476 ABHD8Q96I13 439 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 UBXN6Q9BZV1 441 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 PARVGQ9HBI0 331 aa18.44■□□□□ 0.54
CPSF4-201ENST00000292476 PGK2P07205 417 aa18.43■□□□□ 0.54
CPSF4-201ENST00000292476 ACTR2P61160 394 aa18.43■□□□□ 0.54
CPSF4-201ENST00000292476 TBC1D8BQ0IIM8 1120 aa18.43■□□□□ 0.54
CPSF4-201ENST00000292476 FKBP15Q5T1M5 1219 aa18.43■□□□□ 0.54
CPSF4-201ENST00000292476 PPP4R3CPQ6ZMV5 832 aa18.43■□□□□ 0.54
CPSF4-201ENST00000292476 PORCNQ9H237 461 aa18.43■□□□□ 0.54
CPSF4-201ENST00000292476 DIS3Q9Y2L1 958 aaKnown RBP18.43■□□□□ 0.54
CPSF4-201ENST00000292476 REXO2Q9Y3B8 237 aaKnown RBP18.43■□□□□ 0.54
CPSF4-201ENST00000292476 PCDHA2Q9Y5H9 948 aa18.43■□□□□ 0.54
CPSF4-201ENST00000292476 EIF3CLB5ME19 914 aaKnown RBP18.42■□□□□ 0.54
CPSF4-201ENST00000292476 CAPN15O75808 1086 aa18.42■□□□□ 0.54
CPSF4-201ENST00000292476 HNRNPH3P31942 346 aaKnown RBP18.42■□□□□ 0.54
CPSF4-201ENST00000292476 MTIF2P46199 727 aaKnown RBP18.42■□□□□ 0.54
CPSF4-201ENST00000292476 PLA2G4AP47712 749 aa18.42■□□□□ 0.54
CPSF4-201ENST00000292476 RARRES1P49788 294 aa18.42■□□□□ 0.54
CPSF4-201ENST00000292476 AMPD2Q01433 879 aa18.42■□□□□ 0.54
CPSF4-201ENST00000292476 PKN2Q16513 984 aaKnown RBP18.42■□□□□ 0.54
CPSF4-201ENST00000292476 WDR59Q6PJI9 974 aa18.42■□□□□ 0.54
CPSF4-201ENST00000292476 PADI6Q6TGC4 694 aa18.42■□□□□ 0.54
CPSF4-201ENST00000292476 ABHD15Q6UXT9 468 aa18.42■□□□□ 0.54
CPSF4-201ENST00000292476 SLC17A8Q8NDX2 589 aa18.42■□□□□ 0.54
CPSF4-201ENST00000292476 EIF3CQ99613 913 aaKnown RBP18.42■□□□□ 0.54
CPSF4-201ENST00000292476 CHP1Q99653 195 aa18.42■□□□□ 0.54
CPSF4-201ENST00000292476 RUSC1Q9BVN2 902 aa18.42■□□□□ 0.54
CPSF4-201ENST00000292476 WRAP73Q9P2S5 460 aaPredicted RBP18.42■□□□□ 0.54
CPSF4-201ENST00000292476 LCTP09848 1927 aa18.42■□□□□ 0.54
CPSF4-201ENST00000292476 NPHP3-ACAD11A0A0J9YXS1 232 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 A0A0U1RQJ8 604 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 ATG7O95352 703 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 SUPT20HL2P0C7V6 817 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 TRIM21P19474 475 aaKnown RBP18.41■□□□□ 0.54
CPSF4-201ENST00000292476 RAD51AP2Q09MP3 1159 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 ARHGEF6Q15052 776 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 MIIPQ5JXC2 388 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 FBXO46Q6PJ61 603 aaPredicted RBP18.41■□□□□ 0.54
CPSF4-201ENST00000292476 ATRIPQ8WXE1 791 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 LARSQ9P2J5 1176 aaKnown RBP18.41■□□□□ 0.54
CPSF4-201ENST00000292476 GABBR1Q9UBS5 961 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 KCNG1Q9UIX4 513 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 CTAGE15A4D2H0 777 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 PES1O00541 588 aaKnown RBP18.41■□□□□ 0.54
CPSF4-201ENST00000292476 EIF3DO15371 548 aaKnown RBP eCLIP18.41■□□□□ 0.54
CPSF4-201ENST00000292476 KRT86O43790 486 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 ERLIN1O75477 346 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 IPO7O95373 1038 aaKnown RBP18.41■□□□□ 0.54
CPSF4-201ENST00000292476 CTAGE8P0CG41 777 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 ADORA2AP29274 412 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 ZNF131P52739 623 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 FCGRTP55899 365 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 ALCAMQ13740 583 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 METTL7BQ6UX53 244 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 CYFIP1Q7L576 1253 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 PLEKHH3Q7Z736 793 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 CTAGE6Q86UF2 777 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 CTAGE4Q8IX94 777 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 MYCT1Q8N699 235 aa18.41■□□□□ 0.54
CPSF4-201ENST00000292476 HPS3Q969F9 1004 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms