RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 NYAP1Q6ZVC0 841 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 MCF2L2Q86YR7 1114 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 KIAA2013Q8IYS2 634 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 ARHGAP18Q8N392 663 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 C7orf31Q8N865 590 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 FAM193BQ96PV7 902 aaPredicted RBP11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 LRRC37BQ96QE4 947 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 ACCSQ96QU6 501 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 ZBTB18Q99592 522 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 MLXIPLQ9NP71 852 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 ABCF3Q9NUQ8 709 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 CEMIPQ8WUJ3 1361 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 MFAP3LO75121 409 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 KRT4P19013 534 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 HLA-DPA1P20036 260 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 CTSWP56202 376 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 FAM81BQ96LP2 452 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 OSBPL5Q9H0X9 879 aaPredicted RBP11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 THAP9Q9H5L6 903 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 NXF1Q9UBU9 619 aaKnown RBP11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 DCTN4Q9UJW0 460 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 L3MBTL1Q9Y468 752 aa11.49□□□□□ -0.57
PKNOX1-201ENST00000291547 RAD23BP54727 409 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 TAF1BQ53T94 588 aaPredicted RBP11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 USPL1Q5W0Q7 1092 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 ANKRD36BP1Q96IX9 119 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 FAM161BQ96MY7 647 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 OLFM3Q96PB7 478 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 NDE1Q9NXR1 346 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 CPSF3Q9UKF6 684 aaKnown RBP11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 LZTS1Q9Y250 596 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 CYP21A2P08686 494 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 PMLP29590 882 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 BCAMP50895 628 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 MRPS15P82914 257 aaKnown RBP11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 TFAMQ00059 246 aaKnown RBP11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 MORF4L2Q15014 288 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 PAWRQ96IZ0 340 aaKnown RBP11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 EMILIN3Q9NT22 766 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 MON2Q7Z3U7 1717 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 ERVV-1B6SEH8 477 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 MYL1P05976 194 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 AP2B1P63010 937 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 NR5A1Q13285 461 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 CERKLQ49MI3 558 aaPredicted RBP11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 TEDDM1Q5T9Z0 273 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 SLC17A8Q8NDX2 589 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 FLAD1Q8NFF5 587 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 PCDHA4Q9UN74 947 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 CHD2O14647 1828 aaKnown RBP11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 RASSF10A6NK89 507 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 INO80B-WBP1J3KQ70 363 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 XPOTO43592 962 aaKnown RBP11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 SRGAP2O75044 1071 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 ATP2B4P23634 1241 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 SOX5P35711 763 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 SLC7A3Q8WY07 619 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 USP6NLQ92738 828 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 AMNQ9BXJ7 453 aa11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 INO80BQ9C086 356 aaPredicted RBP11.48□□□□□ -0.57
PKNOX1-201ENST00000291547 KRT38O76015 456 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 FMNL1O95466 1100 aaPredicted RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 KCNA4P22459 653 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 CUL3Q13618 768 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 KRT31Q15323 416 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 CCDC85BQ15834 202 aaPredicted RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 EPM2AIP1Q7L775 607 aaPredicted RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 HNRNPLLQ8WVV9 542 aaKnown RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 RPS6KC1Q96S38 1066 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 KIF2CQ99661 725 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 CCDC159P0C7I6 412 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 PDE6BP35913 854 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 ACAD11Q709F0 780 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 TTLL11Q8NHH1 800 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 ZC3H15Q8WU90 426 aaKnown RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 ATP6V0A1Q93050 837 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 NR1H4Q96RI1 486 aaPredicted RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 SEPT9Q9UHD8 586 aaPredicted RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 MEGF6O75095 1541 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 TYW5A2RUC4 315 aaKnown RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 APOA1P02647 267 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 TAC1P20366 129 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 IFNA8P32881 189 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 TRPC1P48995 793 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 ARL4CP56559 192 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 PSMC1P62191 440 aaKnown RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 RCSD1Q6JBY9 416 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 RHOT2Q8IXI1 618 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 GSPT2Q8IYD1 628 aaKnown RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 TEX9Q8N6V9 391 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 STAMBPL1Q96FJ0 436 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 KIF9Q9HAQ2 790 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 MEFVO15553 781 aaPredicted RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 KDM1AO60341 852 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 CD58P19256 250 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 HDAC4P56524 1084 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 PPP2R2AP63151 447 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 TFDP1Q14186 410 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms