RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 STK3Q13188 491 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 DUSP6Q16828 381 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 HERC4Q5GLZ8 1057 aaPredicted RBP9.97□□□□□ -0.81
TFF1-201ENST00000291527 SYCE2Q6PIF2 218 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 B3GNT9Q6UX72 402 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 ZNF598Q86UK7 904 aaKnown RBP9.97□□□□□ -0.81
TFF1-201ENST00000291527 TMEM173Q86WV6 379 aaPredicted RBP9.97□□□□□ -0.81
TFF1-201ENST00000291527 ECHDC2Q86YB7 292 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 ZNF713Q8N859 430 aaPredicted RBP9.97□□□□□ -0.81
TFF1-201ENST00000291527 RNF169Q8NCN4 708 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 MICAL1Q8TDZ2 1067 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 TBCKQ8TEA7 893 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 AUTS2Q8WXX7 1259 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
TFF1-201ENST00000291527 SLC5A5Q92911 643 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 LPPQ93052 612 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 TLE6Q9H808 572 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 C6orf50Q9HD87 102 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 DISC1Q9NRI5 854 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 WRAP73Q9P2S5 460 aaPredicted RBP9.97□□□□□ -0.81
TFF1-201ENST00000291527 KCNJ14Q9UNX9 436 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 CACNA1HO95180 2353 aa9.97□□□□□ -0.81
TFF1-201ENST00000291527 ARID2Q68CP9 1835 aa9.96□□□□□ -0.81
TFF1-201ENST00000291527 FAM205CA6NFA0 338 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 ZBTB39O15060 712 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 GPR182O15218 404 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 SLC37A4O43826 429 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 PSMD10O75832 226 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 OATP04181 439 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 ALADP13716 330 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 IFNAR1P17181 557 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 RCAN1P53805 252 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 EVCP57679 992 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 FGD1P98174 961 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 NHLH1Q02575 133 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 KRT32Q14532 448 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 NAALADL2Q58DX5 795 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 EARS2Q5JPH6 523 aaKnown RBP9.96□□□□□ -0.82
TFF1-201ENST00000291527 PLA2G4FQ68DD2 849 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 THNSL1Q8IYQ7 743 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 PIAS4Q8N2W9 510 aaPredicted RBP9.96□□□□□ -0.82
TFF1-201ENST00000291527 PRSS33Q8NF86 280 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 HELQQ8TDG4 1101 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 SUSD6Q92537 303 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 RPGRIP1Q96KN7 1286 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 UPF3BQ9BZI7 483 aaKnown RBP9.96□□□□□ -0.82
TFF1-201ENST00000291527 ATP6V0A4Q9HBG4 840 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 TLR9Q9NR96 1032 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 TBC1D22BQ9NU19 505 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 TMEM161AQ9NX61 479 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 SAMM50Q9Y512 469 aa9.96□□□□□ -0.82
TFF1-201ENST00000291527 ZFHX2Q9C0A1 2572 aaPredicted RBP9.96□□□□□ -0.82
TFF1-201ENST00000291527 A0A087WZ62 844 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 WDR64B1ANS9 1081 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 NCK2O43639 380 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 PDGFBP01127 241 aaPredicted RBP9.95□□□□□ -0.82
TFF1-201ENST00000291527 DARSP14868 501 aaKnown RBP9.95□□□□□ -0.82
TFF1-201ENST00000291527 EIF4BP23588 611 aaKnown RBP9.95□□□□□ -0.82
TFF1-201ENST00000291527 NPEPPSP55786 919 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 NLRP5P59047 1200 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 MTERF2Q49AM1 385 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 KCNT2Q6UVM3 1135 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 FBXL16Q8N461 479 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 C12orf76Q8N812 135 aaPredicted RBP9.95□□□□□ -0.82
TFF1-201ENST00000291527 ETNPPLQ8TBG4 499 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 OXER1Q8TDS5 423 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 EDAQ92838 391 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 TCF25Q9BQ70 676 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 FDXACB1Q9BRP7 624 aaPredicted RBP9.95□□□□□ -0.82
TFF1-201ENST00000291527 VN1R3Q9BXE9 311 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 RNF26Q9BY78 433 aaPredicted RBP9.95□□□□□ -0.82
TFF1-201ENST00000291527 ZSWIM6Q9HCJ5 1215 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 C1orf112Q9NSG2 853 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 ARIH1Q9Y4X5 557 aaPredicted RBP9.95□□□□□ -0.82
TFF1-201ENST00000291527 PCDHB12Q9Y5F1 795 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 PLXNA3P51805 1871 aa9.95□□□□□ -0.82
TFF1-201ENST00000291527 FRYLO94915 3013 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 A0A087WWV3 80 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 IGKV6-21A0A0C4DH24 114 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 TMEM221A6NGB7 291 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 M0R296 226 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 WNT7AO00755 349 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 GAS7O60861 476 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 HMGB1P09429 215 aaKnown RBP9.94□□□□□ -0.82
TFF1-201ENST00000291527 TECP42680 631 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 VCPP55072 806 aaKnown RBP9.94□□□□□ -0.82
TFF1-201ENST00000291527 ZXDAP98168 799 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 SETQ01105 290 aaPredicted RBP9.94□□□□□ -0.82
TFF1-201ENST00000291527 CBX2Q14781 532 aaPredicted RBP9.94□□□□□ -0.82
TFF1-201ENST00000291527 CSPP1Q1MSJ5 1256 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 LRCH2Q5VUJ6 765 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 ANKRD54Q6NXT1 300 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 ANO5Q75V66 913 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 RUFY3Q7L099 469 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 SMAP1Q8IYB5 467 aaPredicted RBP9.94□□□□□ -0.82
TFF1-201ENST00000291527 MRPS27Q92552 414 aaKnown RBP9.94□□□□□ -0.82
TFF1-201ENST00000291527 MBOAT7Q96N66 472 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 TMEM117Q9H0C3 514 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 GLT8D2Q9H1C3 349 aa9.94□□□□□ -0.82
TFF1-201ENST00000291527 ELAC1Q9H777 363 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms