RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 DARSP14868 501 aaKnown RBP11.75□□□□□ -0.53
SNF8-201ENST00000290330 KCNA5P22460 613 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 KRT2P35908 639 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 QARSP47897 775 aaKnown RBP11.75□□□□□ -0.53
SNF8-201ENST00000290330 ST3GAL1Q11201 340 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 CAMK1Q14012 370 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 COL19A1Q14993 1142 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 LEXMQ3ZCV2 418 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 NAALADL2Q58DX5 795 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 FAM102BQ5T8I3 360 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 PABPC5Q96DU9 382 aaKnown RBP11.75□□□□□ -0.53
SNF8-201ENST00000290330 ELAC1Q9H777 363 aaKnown RBP11.75□□□□□ -0.53
SNF8-201ENST00000290330 BRMS1Q9HCU9 246 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 ALG13Q9NP73 1137 aaKnown RBP11.75□□□□□ -0.53
SNF8-201ENST00000290330 TMEM161AQ9NX61 479 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 LOXHD1Q8IVV2 1947 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 TRANK1O15050 2925 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 REV3LO60673 3130 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 RALGAPA2Q2PPJ7 1873 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 NLRC5Q86WI3 1866 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 TBKBP1A7MCY6 615 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 BTBD18B2RXH4 712 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 MARCH6O60337 910 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 MAFO75444 373 aaPredicted RBP11.74□□□□□ -0.53
SNF8-201ENST00000290330 ITGB1P05556 798 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 P4HBP07237 508 aaKnown RBP11.74□□□□□ -0.53
SNF8-201ENST00000290330 FGFR1P11362 822 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 ZSCAN20P17040 1043 aaPredicted RBP11.74□□□□□ -0.53
SNF8-201ENST00000290330 CDC42EP1Q00587 391 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 SPIRE1Q08AE8 756 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 EPHA7Q15375 998 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 PLA2G4FQ68DD2 849 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 KLHL23Q8NBE8 558 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.74□□□□□ -0.53
SNF8-201ENST00000290330 SPPL3Q8TCT6 385 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 NLRP7Q8WX94 980 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 SCLT1Q96NL6 688 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 IPO9Q96P70 1041 aaKnown RBP11.74□□□□□ -0.53
SNF8-201ENST00000290330 ATP6V0A4Q9HBG4 840 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 WRAP73Q9P2S5 460 aaPredicted RBP11.74□□□□□ -0.53
SNF8-201ENST00000290330 WDR81Q562E7 1941 aa11.74□□□□□ -0.53
SNF8-201ENST00000290330 TCF20Q9UGU0 1960 aaKnown RBP11.74□□□□□ -0.53
SNF8-201ENST00000290330 A0A087WZ62 844 aa11.73□□□□□ -0.53
SNF8-201ENST00000290330 H3BQ06 376 aaPredicted RBP11.73□□□□□ -0.53
SNF8-201ENST00000290330 DKC1O60832 514 aaKnown RBP eCLIP11.73□□□□□ -0.53
SNF8-201ENST00000290330 CSDE1O75534 798 aaKnown RBP11.73□□□□□ -0.53
SNF8-201ENST00000290330 BAG4O95429 457 aaKnown RBP11.73□□□□□ -0.53
SNF8-201ENST00000290330 FGFR4P22455 802 aa11.73□□□□□ -0.53
SNF8-201ENST00000290330 DNAJB1P25685 340 aa11.73□□□□□ -0.53
SNF8-201ENST00000290330 DNM2P50570 870 aa11.73□□□□□ -0.53
SNF8-201ENST00000290330 NPEPPSP55786 919 aa11.73□□□□□ -0.53
SNF8-201ENST00000290330 C4orf19Q8IY42 314 aa11.73□□□□□ -0.53
SNF8-201ENST00000290330 DIS3L2Q8IYB7 885 aaKnown RBP11.73□□□□□ -0.53
SNF8-201ENST00000290330 SLFN12Q8IYM2 578 aa11.73□□□□□ -0.53
SNF8-201ENST00000290330 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
SNF8-201ENST00000290330 FDXACB1Q9BRP7 624 aaPredicted RBP11.73□□□□□ -0.53
SNF8-201ENST00000290330 GCOM2Q9BZD3 368 aaPredicted RBP11.73□□□□□ -0.53
SNF8-201ENST00000290330 CYP26B1Q9NR63 512 aa11.73□□□□□ -0.53
SNF8-201ENST00000290330 TYW1Q9NV66 732 aaKnown RBP11.73□□□□□ -0.53
SNF8-201ENST00000290330 RGL1Q9NZL6 768 aa11.73□□□□□ -0.53
SNF8-201ENST00000290330 SUCLA2Q9P2R7 463 aaPredicted RBP11.73□□□□□ -0.53
SNF8-201ENST00000290330 HCSTQ9UBK5 93 aa11.73□□□□□ -0.53
SNF8-201ENST00000290330 LIMCH1Q9UPQ0 1083 aa11.73□□□□□ -0.53
SNF8-201ENST00000290330 A0A0U1RQF3 1178 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 WNT7AO00755 349 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 NCK2O43639 380 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 ABCB7O75027 752 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 CSPG5O95196 566 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 YWHABP31946 246 aaKnown RBP11.72□□□□□ -0.53
SNF8-201ENST00000290330 IRS1P35568 1242 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 LTBRP36941 435 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 FOSBP53539 338 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 HYAL1Q12794 435 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 TRIM29Q14134 588 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 SPOUT1Q5T280 376 aaKnown RBP11.72□□□□□ -0.53
SNF8-201ENST00000290330 NCAPH2Q6IBW4 605 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 EP400NLQ6ZTU2 488 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 ZNF410Q86VK4 478 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 ECHDC2Q86YB7 292 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 RHPN2Q8IUC4 686 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 KSR1Q8IVT5 923 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 POF1BQ8WVV4 589 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 SLC7A3Q8WY07 619 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 CEP170P1Q96L14 293 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 CASD1Q96PB1 797 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 KIF2CQ99661 725 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 JPH2Q9BR39 696 aaPredicted RBP11.72□□□□□ -0.53
SNF8-201ENST00000290330 LXNQ9BS40 222 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 TMEM117Q9H0C3 514 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 DHX33Q9H6R0 707 aaKnown RBP11.72□□□□□ -0.53
SNF8-201ENST00000290330 CWH43Q9H720 699 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 AAASQ9NRG9 546 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 RNF19AQ9NV58 838 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 CLDND1Q9NY35 253 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 PCDHA12Q9UN75 941 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 PCDHB12Q9Y5F1 795 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 BRWD1Q9NSI6 2320 aa11.72□□□□□ -0.53
SNF8-201ENST00000290330 GRXCR2A6NFK2 248 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms